RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CRTC3Q6UUV7 619 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 CHST15Q7LFX5 561 aaPredicted RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 LINC00523Q86TU6 105 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 KLHDC8BQ8IXV7 354 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 DNAAF3Q8N9W5 541 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 OR4K2Q8NGD2 314 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 BRSK1Q8TDC3 778 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 GPBAR1Q8TDU6 330 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 VPS35Q96QK1 796 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 OSBPL9Q96SU4 736 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 NAP1L3Q99457 506 aaPredicted RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 DPH1Q9BZG8 443 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ZCCHC2Q9C0B9 1178 aaKnown RBP14.4□□□□□ -0.1
USP39-206ENST00000448971 RMI1Q9H9A7 625 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ETNK1Q9HBU6 452 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 IL26Q9NPH9 171 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 HOMER3Q9NSC5 361 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 TAAR2Q9P1P5 351 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 ATXN10Q9UBB4 475 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 FKBPLQ9UIM3 349 aa14.4□□□□□ -0.1
USP39-206ENST00000448971 KLK10O43240 276 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 DNAJC6O75061 913 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 ZSCAN5DPP0CG00 497 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 ZNF8P17098 575 aaPredicted RBP14.39□□□□□ -0.11
USP39-206ENST00000448971 AKT1P31749 480 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 KCNJ1P48048 391 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 TMPRSS15P98073 1019 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 CDH17Q12864 832 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 SEMA5AQ13591 1074 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 POU6F1Q14863 301 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 CHRNA6Q15825 494 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 INSCQ1MX18 579 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 C14orf28Q4W4Y0 310 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 PERM1Q5SV97 790 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 DENND5AQ6IQ26 1287 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 NRROSQ86YC3 692 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 RASGEF1CQ8N431 466 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 GLIS1Q8NBF1 620 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 OR13C4Q8NGS5 318 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 ZDHHC1Q8WTX9 485 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 KCNE4Q8WWG9 221 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 CCDC74AQ96AQ1 378 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
USP39-206ENST00000448971 PRR11Q96HE9 360 aaPredicted RBP14.39□□□□□ -0.11
USP39-206ENST00000448971 MS4A14Q96JA4 679 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 TTC25Q96NG3 672 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 SLC46A1Q96NT5 459 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 CCDC3Q9BQI4 270 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 AP1M1Q9BXS5 423 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 ARNT2Q9HBZ2 717 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 SMARCAL1Q9NZC9 954 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 SNX12Q9UMY4 172 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 KCNK6Q9Y257 313 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 PLEKHM1Q9Y4G2 1056 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 KCTD3Q9Y597 815 aa14.39□□□□□ -0.11
USP39-206ENST00000448971 GOLGA6L10A0A0M3HER8 536 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 GPR89AB7ZAQ6 455 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 B8ZZF3 427 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 GRID2O43424 1007 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 NUAK1O60285 661 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 NOBOXO60393 691 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 CDK14O94921 469 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 APRTP07741 180 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 GPR89BP0CG08 455 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 TPH1P17752 444 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 HADHAP40939 763 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 ZNF140P52738 457 aaPredicted RBP14.38□□□□□ -0.11
USP39-206ENST00000448971 MAZP56270 477 aaKnown RBP14.38□□□□□ -0.11
USP39-206ENST00000448971 GNG11P61952 73 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 LY6DQ14210 128 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 ADGRG6Q86SQ4 1221 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 TRAPPC5Q8IUR0 188 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 SFTPA2Q8IWL1 248 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 PRELID2Q8N945 189 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 GPR156Q8NFN8 814 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 OR6C4Q8NGE1 309 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 OR52K1Q8NGK4 314 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 COG1Q8WTW3 980 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 DNAJC1Q96KC8 554 aaKnown RBP14.38□□□□□ -0.11
USP39-206ENST00000448971 OSGEPL1Q9H4B0 414 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 TRIM39Q9HCM9 518 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 THSD1Q9NS62 852 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 SPATS2LQ9NUQ6 558 aaKnown RBP14.38□□□□□ -0.11
USP39-206ENST00000448971 CRLS1Q9UJA2 301 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 APPL1Q9UKG1 709 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 SATB2Q9UPW6 733 aa14.38□□□□□ -0.11
USP39-206ENST00000448971 DRG1Q9Y295 367 aaKnown RBP14.38□□□□□ -0.11
USP39-206ENST00000448971 PCYT1BQ9Y5K3 369 aaPredicted RBP14.38□□□□□ -0.11
USP39-206ENST00000448971 COL12A1Q99715 3063 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 CCDC78A2IDD5 438 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 CCL22O00626 93 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 VEGFDO43915 354 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A9O60656 530 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 SRP72O76094 671 aaKnown RBP14.37□□□□□ -0.11
USP39-206ENST00000448971 TCP1P17987 556 aaKnown RBP14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A6P19224 532 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 ITGALP20701 1170 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A1P22309 533 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A4P22310 534 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms