RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 BSNQ9UPA5 3926 aa15.3■□□□□ 0.04
TRA2A-203ENST00000448549 ZNF711Q9Y462 761 aa15.3■□□□□ 0.04
TRA2A-203ENST00000448549 MRPS18BQ9Y676 258 aaKnown RBP15.3■□□□□ 0.04
TRA2A-203ENST00000448549 RPS6KL1Q9Y6S9 549 aa15.3■□□□□ 0.04
TRA2A-203ENST00000448549 C3orf70A6NLC5 250 aaPredicted RBP15.29■□□□□ 0.04
TRA2A-203ENST00000448549 KMOO15229 486 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 BPIP17213 487 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 RPL10P27635 214 aaKnown RBP15.29■□□□□ 0.04
TRA2A-203ENST00000448549 MAP7Q14244 749 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 SLC18A3Q16572 532 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 KHDC1Q4VXA5 237 aaKnown RBP15.29■□□□□ 0.04
TRA2A-203ENST00000448549 PDPK2PQ6A1A2 396 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 SLC9A4Q6AI14 798 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 NPNTQ6UXI9 565 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 ZNF547Q8IVP9 402 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 SPATA22Q8NHS9 363 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 ELMO2Q96JJ3 720 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 OR6C1Q96RD1 312 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
TRA2A-203ENST00000448549 SLC25A51Q9H1U9 297 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 NFKBIL1Q9UBC1 381 aaPredicted RBP15.29■□□□□ 0.04
TRA2A-203ENST00000448549 ANAPC2Q9UJX6 822 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 MAST4O15021 2626 aa15.29■□□□□ 0.04
TRA2A-203ENST00000448549 PRR19A6NJB7 356 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 OR52A4PA6NMU1 304 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 APOL1O14791 398 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 AURKAO14965 403 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 TOX3O15405 576 aaPredicted RBP15.28■□□□□ 0.04
TRA2A-203ENST00000448549 KIF1CO43896 1103 aaKnown RBP15.28■□□□□ 0.04
TRA2A-203ENST00000448549 VEGFDO43915 354 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 RASSF9O75901 435 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 CDK14O94921 469 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 MT-CYBP00156 380 aaPredicted RBP15.28■□□□□ 0.04
TRA2A-203ENST00000448549 BRAFP15056 766 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 HNRNPH3P31942 346 aaKnown RBP15.28■□□□□ 0.04
TRA2A-203ENST00000448549 DLSTP36957 453 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 DRG2P55039 364 aaKnown RBP15.28■□□□□ 0.04
TRA2A-203ENST00000448549 SRSF1Q07955 248 aaKnown RBP eCLIP15.28■□□□□ 0.042e-9■□□□□ 10.2
TRA2A-203ENST00000448549 PDK1Q15118 436 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 CRTC2Q53ET0 693 aaPredicted RBP15.28■□□□□ 0.04
TRA2A-203ENST00000448549 ABRAXAS1Q6UWZ7 409 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 C6orf15Q6UXA7 325 aaPredicted RBP15.28■□□□□ 0.04
TRA2A-203ENST00000448549 GALNT6Q8NCL4 622 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 RSC1A1Q92681 617 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 OLFM3Q96PB7 478 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 TIMM29Q9BSF4 260 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 BPIFA1Q9NP55 256 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 SLC40A1Q9NP59 571 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 TRIM10Q9UDY6 481 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 TMPRSS11EQ9UL52 423 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 SPO11Q9Y5K1 396 aa15.28■□□□□ 0.04
TRA2A-203ENST00000448549 ZNF487B1APH4 448 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 GOLGA6L19H0YKK7 550 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 PMPCBO75439 489 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 TMEM253P0C7T8 217 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 IDSP22304 550 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 FOXK1P85037 733 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 SEPT6Q14141 434 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 GPR18Q14330 331 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 IL11RAQ14626 422 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 ASTE1Q2TB18 679 aaPredicted RBP15.27■□□□□ 0.04
TRA2A-203ENST00000448549 CCDC70Q6NSX1 233 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 FAM92BQ6ZTR7 304 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 RASGRP3Q8IV61 690 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 SLC35G2Q8TBE7 412 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 RNF25Q96BH1 459 aaPredicted RBP15.27■□□□□ 0.04
TRA2A-203ENST00000448549 ZNF768Q9H5H4 540 aaKnown RBP15.27■□□□□ 0.04
TRA2A-203ENST00000448549 GLOD4Q9HC38 313 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 POT1Q9NUX5 634 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 UBP1Q9NZI7 540 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 CROTQ9UKG9 612 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 PCDHB3Q9Y5E6 796 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 KCNMB2Q9Y691 235 aa15.27■□□□□ 0.04
TRA2A-203ENST00000448549 PPP1R12AO14974 1030 aaPredicted RBP15.26■□□□□ 0.03
TRA2A-203ENST00000448549 KIAA0754O94854 1291 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 NDUFA10O95299 355 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 NDST3O95803 873 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 KRT1P04264 644 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 CAPZBP47756 277 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 DYNLT1P63172 113 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 ERV3-1Q14264 604 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 SLC14A2Q15849 920 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 ATP13A5Q4VNC0 1218 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 LACTB2Q53H82 288 aaPredicted RBP15.26■□□□□ 0.03
TRA2A-203ENST00000448549 TEX44Q53QW1 395 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 AGAP9Q5VTM2 703 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 CACHD1Q5VU97 1274 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 IRGCQ6NXR0 463 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 WASH2PQ6VEQ5 465 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 C11orf96Q7Z7L8 435 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 RFX6Q8HWS3 928 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 TRAPPC5Q8IUR0 188 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 CXorf40BQ96DE9 158 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 STAMBPL1Q96FJ0 436 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 ZDHHC12Q96GR4 267 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 VPS35Q96QK1 796 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 DEF6Q9H4E7 631 aa15.26■□□□□ 0.03
TRA2A-203ENST00000448549 WASH6PQ9NQA3 447 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms