RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 MAP2K4P45985 399 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 SELENBP1Q13228 472 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 SNX17Q15036 470 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 UGT3A1Q6NUS8 523 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 RAB44Q7Z6P3 723 aaPredicted RBP20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 SLC22A16Q86VW1 577 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 CNIH3Q8TBE1 160 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 FRS2Q8WU20 508 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 TMEM40Q8WWA1 233 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 GLMNQ92990 594 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 PIRTP0C851 137 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 EEFSECP57772 596 aaKnown RBP20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 YWHAHQ04917 246 aaPredicted RBP20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 KCNAB2Q13303 367 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 SEMA3AQ14563 771 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 MAPRE1Q15691 268 aaKnown RBP20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 KDELC1Q6UW63 502 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 PRR23BQ6ZRT6 265 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 FIG4Q92562 907 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 HDAC2Q92769 488 aaKnown RBP20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 PGAP3Q96FM1 320 aaPredicted RBP20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 EPS8L2Q9H6S3 715 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 SCUBE2Q9NQ36 999 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 CNGB3Q9NQW8 809 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 AIG1Q9NVV5 245 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 RBPJLQ9UBG7 517 aa20.29■□□□□ 0.84
SMARCD2-203ENST00000448276 DNAJC25-GNG10A0A024R161 153 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 NDUFS2O75306 463 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 DEAF1O75398 565 aaPredicted RBP20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 DGKQP52824 942 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 NFKB2Q00653 900 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 DSC2Q02487 901 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 TFAP2DQ7Z6R9 452 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 ZDHHC13Q8IUH4 622 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 MFSD4AQ8N468 514 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 MAGED4Q96JG8 741 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 LEF1Q9UJU2 399 aaPredicted RBP20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 CSADQ9Y600 493 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 DDNO94850 711 aaPredicted RBP20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 HTR1EP28566 365 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 PGFP49763 221 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 EMX2Q04743 252 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 SLC13A2Q13183 592 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 SCML4Q8N228 414 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 ZCCHC7Q8N3Z6 543 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 ARL10Q8N8L6 244 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 LEMD2Q8NC56 503 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 OTUD5Q96G74 571 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 PSD2Q9BQI7 771 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 ZNF225Q9UK10 706 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 FBXO10Q9UK96 956 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 SNX5Q9Y5X3 404 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 ZSWIM8A7E2V4 1837 aa20.28■□□□□ 0.84
SMARCD2-203ENST00000448276 C16orf96A6NNT2 1141 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 ADM5C9JUS6 153 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 PAGE1O75459 146 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 GMNNO75496 209 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 F9P00740 461 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 PCMT1P22061 227 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 CCR1P32246 355 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 PNPLA4P41247 253 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 CATSPEREQ5SY80 951 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 DEPDC1Q5TB30 811 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 SULT1C3Q6IMI6 304 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 SPESP1Q6UW49 350 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 FRA10AC1Q70Z53 315 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 SYVN1Q86TM6 617 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 OR7A2PQ8NGA2 310 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 CDK15Q96Q40 435 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 NODALQ96S42 347 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 LRRC3Q9BY71 257 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 WDR12Q9GZL7 423 aaKnown RBP20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 SCHIP1Q9P0W5 487 aaPredicted RBP20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 PNMA8BQ9ULN7 279 aaPredicted RBP20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 FAM50BQ9Y247 325 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 U3KQV3 271 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 MEIS3P2A8K0S8 358 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 HHLA1C9JL84 531 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 PFDN6O15212 129 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 TBC1D4O60343 1298 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 GPR32O75388 356 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 TCEA1P23193 301 aaKnown RBP20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 DGCR6Q14129 220 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 CRY1Q16526 586 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 AGAP7PQ5VUJ5 663 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 TMEM179BQ7Z7N9 219 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 C14orf80Q86SX3 495 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 PROSER1Q86XN7 944 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 LGI2Q8N0V4 545 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 GPC2Q8N158 579 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 OR10Q1Q8NGQ4 319 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 HTRA1Q92743 480 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 ATOH8Q96SQ7 321 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 MUC13Q9H3R2 512 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 SMOC2Q9H3U7 446 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 ELP3Q9H9T3 547 aa20.27■□□□□ 0.84
SMARCD2-203ENST00000448276 BRCA1P38398 1863 aaKnown RBP20.27■□□□□ 0.83
SMARCD2-203ENST00000448276 MIA3Q5JRA6 1907 aa20.26■□□□□ 0.83
SMARCD2-203ENST00000448276 A6NL46 340 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms