RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 TRIM48Q8IWZ4 208 aa16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 ESX1Q8N693 406 aa16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 PMEPA1Q969W9 287 aa16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 RNF25Q96BH1 459 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 ZCCHC2Q9C0B9 1178 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 RAB33BQ9H082 229 aa16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 OSGEPL1Q9H4B0 414 aa16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 GPN2Q9H9Y4 310 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 EPHA6Q9UF33 1036 aa16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 DNMT3AQ9Y6K1 912 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-204ENST00000443891 A8MU76 341 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 HACD1B0YJ81 288 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 SUV39H1O43463 412 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 UBXN7O94888 489 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 MT-CYBP00156 380 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 FAM87AP0C7U9 286 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 CDKN2BP42772 138 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 CCR10P46092 362 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 IL11RAQ14626 422 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 PCSK7Q16549 785 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 ALS2CLQ60I27 953 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 MFSD7Q6UXD7 560 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 NPNTQ6UXI9 565 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 PRICKLE2Q7Z3G6 844 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 KDELC2Q7Z4H8 507 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 JPH3Q8WXH2 748 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 P3H4Q92791 437 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 C9orf72Q96LT7 481 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 TTC25Q96NG3 672 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 FCRL5Q96RD9 977 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 CEP41Q9BYV8 373 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 SPTLC3Q9NUV7 552 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 ZFC3H1O60293 1989 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 SDK2Q58EX2 2172 aa16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 FLNBO75369 2602 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-204ENST00000443891 KLHL33A6NCF5 533 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 PDZK1P1A8MUH7 402 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 TERTO14746 1132 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 CST8O60676 142 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 STK17BO94768 372 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 PIRTP0C851 137 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 AMD1P17707 334 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 HLA-DPA1P20036 260 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 COMTP21964 271 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 SLC19A1P41440 591 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 MAPK9P45984 424 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 DMPKQ09013 629 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 TMEM115Q12893 351 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 TFDP3Q5H9I0 405 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 LDLRAP1Q5SW96 308 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 CRTC3Q6UUV7 619 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 PRSS42Q7Z5A4 293 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 RCOR2Q8IZ40 523 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 SPATA22Q8NHS9 363 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 ZDHHC12Q96GR4 267 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 CALR3Q96L12 384 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 TBC1D10AQ9BXI6 508 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 ZNF768Q9H5H4 540 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 SLC40A1Q9NP59 571 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 SIDT1Q9NXL6 827 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 ZNF624Q9P2J8 865 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 SLC23A2Q9UGH3 650 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 IL17BQ9UHF5 180 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 TRHDEQ9UKU6 1024 aa16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.06■□□□□ 0.16
CTDSP1-204ENST00000443891 ASH1LQ9NR48 2969 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 PMPCBO75439 489 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 ZRANB2O95218 330 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 ZIC2O95409 532 aaPredicted RBP16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 DLGAP3O95886 979 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 HALP42357 657 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 WNT3AP56704 352 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 DYNLT1P63172 113 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 CYP4F2P78329 520 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 WASHC5Q12768 1159 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 MPP3Q13368 585 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 ITGA9Q13797 1035 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 CLCA4Q14CN2 919 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 KLHL35Q6PF15 583 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 KDELC1Q6UW63 502 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 ZNF547Q8IVP9 402 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 KATNAL2Q8IYT4 538 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 ZNF514Q96K75 400 aaPredicted RBP16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 FERMT1Q9BQL6 677 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 OGFRQ9NZT2 677 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 SCHIP1Q9P0W5 487 aaPredicted RBP16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 SPTA1P02549 2419 aa16.05■□□□□ 0.16
CTDSP1-204ENST00000443891 GOLGA6L3A6NEY3 463 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 ZNF189O75820 626 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 RECKO95980 971 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 CD68P34810 354 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 SPAM1P38567 509 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 STAT5AP42229 794 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 CAPZBP47756 277 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 POLE2P56282 527 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 KCNAB2Q13303 367 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms