RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 KPNA6O60684 536 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 PRSS23O95084 383 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 NADKO95544 446 aaPredicted RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 HPRP00739 348 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 MT-ND1P03886 318 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 ERCC2P18074 760 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 CHRM3P20309 590 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 PAX3P23760 479 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 LIMS2Q7Z4I7 341 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 RNF180Q86T96 592 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 IFNEQ86WN2 208 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 PROSER1Q86XN7 944 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 C2CD4AQ8NCU7 369 aaPredicted RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 APPL2Q8NEU8 664 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 LILRB4Q8NHJ6 448 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 TSPEARQ8WU66 669 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 PHF10Q8WUB8 498 aaKnown RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 NDRG1Q92597 394 aaKnown RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 PHF21BQ96EK2 531 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 RPL10LQ96L21 214 aaKnown RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 YME1L1Q96TA2 773 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 SEPHS2Q99611 448 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 ADAM2Q99965 735 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 DUSP16Q9BY84 665 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 SLC52A3Q9NQ40 469 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 ZNF229Q9UJW7 825 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 NAALAD2Q9Y3Q0 740 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 ILVBLA1L0T0 632 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 ZNF99A8MXY4 864 aaPredicted RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 CLDN5O00501 218 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 INMTO95050 263 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 KRT75O95678 551 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 LTA4HP09960 611 aaKnown RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 NPR3P17342 541 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 PCMT1P22061 227 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 ADRA1BP35368 520 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 SLC1A2P43004 574 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 PLK1P53350 603 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 CLCQ05315 142 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 DMPKQ09013 629 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 SEMA3BQ13214 749 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 MBTPS1Q14703 1052 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 SV2CQ496J9 727 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 PYCR3Q53H96 274 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 BLOC1S3Q6QNY0 202 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 CAPSLQ8WWF8 208 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 RNF145Q96MT1 663 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 SDR39U1Q9NRG7 319 aaPredicted RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 PCDHGA8Q9Y5G5 932 aa11.8□□□□□ -0.52
LTBR-203ENST00000441074 OAS3Q9Y6K5 1087 aaKnown RBP11.8□□□□□ -0.52
LTBR-203ENST00000441074 TYW5A2RUC4 315 aaKnown RBP11.79□□□□□ -0.52
LTBR-203ENST00000441074 ISPDA4D126 451 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 M0QX08 132 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 TBC1D4O60343 1298 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 CHEK2O96017 543 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 CDH1P12830 882 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 CPB1P15086 417 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 ARNTP27540 789 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 HTR1EP28566 365 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 GRK3P35626 688 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 TAF6P49848 677 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 PPP5CP53041 499 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 EPS8Q12929 822 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 NFYCQ13952 458 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 ACAP2Q15057 778 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 IMPG1Q17R60 797 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 LRIT3Q3SXY7 679 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 RABL3Q5HYI8 236 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 WSCD1Q658N2 575 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 ZNF280DQ6N043 979 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 ADCK1Q86TW2 530 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 RNF135Q8IUD6 432 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 KLHDC8BQ8IXV7 354 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 CLEC4FQ8N1N0 589 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 B3GALNT2Q8NCR0 500 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 DNAJB14Q8TBM8 379 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 CALML6Q8TD86 181 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 L3HYPDHQ96EM0 354 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 TEKT5Q96M29 485 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 NODALQ96S42 347 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 IL12RB2Q99665 862 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 FEM1AQ9BSK4 669 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 TP63Q9H3D4 680 aaPredicted RBP11.79□□□□□ -0.52
LTBR-203ENST00000441074 TOR3AQ9H497 397 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 PCDH12Q9NPG4 1184 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 FAM118AQ9NWS6 357 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 UBP1Q9NZI7 540 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 PCDHB3Q9Y5E6 796 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 ZFC3H1O60293 1989 aaKnown RBP11.79□□□□□ -0.52
LTBR-203ENST00000441074 TSC2P49815 1807 aa11.79□□□□□ -0.52
LTBR-203ENST00000441074 PDCD11Q14690 1871 aaKnown RBP11.79□□□□□ -0.52
LTBR-203ENST00000441074 A0A1W2PP18 115 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 A0A1W2PQ45 241 aaPredicted RBP11.78□□□□□ -0.52
LTBR-203ENST00000441074 A0A1W2PQY0 241 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 AREL1O15033 823 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 ASNA1O43681 348 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 HUS1O60921 280 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 KCNE1P15382 129 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 WARSP23381 471 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms