RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 ST14Q9Y5Y6 855 aa17.49■□□□□ 0.39
CCDC188-201ENST00000439765 FASNP49327 2511 aaKnown RBP17.48■□□□□ 0.39
CCDC188-201ENST00000439765 GAPDHSO14556 408 aaPredicted RBP17.48■□□□□ 0.39
CCDC188-201ENST00000439765 LDB2O43679 373 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 DNAJC6O75061 913 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 PPFIA2O75334 1257 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 GRIA1P42261 906 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 MAGEA6P43360 314 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 CLDN6P56747 220 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 KHDC1Q4VXA5 237 aaKnown RBP17.48■□□□□ 0.39
CCDC188-201ENST00000439765 PYCR3Q53H96 274 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 IZUMO3Q5VZ72 239 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 GUSBP11Q6P575 273 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 SFTPA2Q8IWL1 248 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 ARL10Q8N8L6 244 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 BBOF1Q8ND07 529 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 FAM46DQ8NEK8 389 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 GDAP1Q8TB36 358 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 CPT1BQ92523 772 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 VPS35Q96QK1 796 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 GSDMCQ9BYG8 508 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 TRNAU1APQ9NX07 287 aaKnown RBP17.48■□□□□ 0.39
CCDC188-201ENST00000439765 GRHL1Q9NZI5 618 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 GULP1Q9UBP9 304 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 ZNHIT2Q9UHR6 403 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 RAXQ9Y2V3 346 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 UNC13CQ8NB66 2214 aa17.48■□□□□ 0.39
CCDC188-201ENST00000439765 ESYT3A0FGR9 886 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 CPED1A4D0V7 1026 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 NDC80O14777 642 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A9O60656 530 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 SUN1O94901 812 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 ZNF8P17098 575 aaPredicted RBP17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A6P19224 532 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A1P22309 533 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A4P22310 534 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A3P35503 534 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A5P35504 534 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 ACTR1BP42025 376 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 ACTR1AP61163 376 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 PDE1BQ01064 536 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 E2F1Q01094 437 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 CTBSQ01459 385 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 CDH17Q12864 832 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 KCNJ11Q14654 390 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 NR0B2Q15466 257 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 PLA2G4EQ3MJ16 856 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 CCDC38Q502W7 563 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 RNASEH2BQ5TBB1 312 aaKnown RBP17.47■□□□□ 0.39
CCDC188-201ENST00000439765 LVRNQ6Q4G3 990 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 CRTC3Q6UUV7 619 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 MICALCLQ6ZW33 695 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 ADGRG6Q86SQ4 1221 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 NRROSQ86YC3 692 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 PPIL6Q8IXY8 311 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 IFT20Q8IY31 132 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 SDR16C5Q8N3Y7 309 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 NAT8LQ8N9F0 302 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 MYRIPQ8NFW9 859 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 IFI44Q8TCB0 444 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 GPBAR1Q8TDU6 330 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 GLMNQ92990 594 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 DNAJC1Q96KC8 554 aaKnown RBP17.47■□□□□ 0.39
CCDC188-201ENST00000439765 NRSN2Q9GZP1 204 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 DPEP2Q9H4A9 486 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A7Q9HAW7 530 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A10Q9HAW8 530 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 UGT1A8Q9HAW9 530 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 EVA1BQ9NVM1 165 aa17.47■□□□□ 0.39
CCDC188-201ENST00000439765 TCRBV7S3A2A0A539 114 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 TP73O15350 636 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 ACP5P13686 325 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 TPSB2P20231 275 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 CA5AP35218 305 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 ITGA8P53708 1063 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 INSM1Q01101 510 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-201ENST00000439765 CALCOCO2Q13137 446 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 TARDBPQ13148 414 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCDC188-201ENST00000439765 ITGA9Q13797 1035 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 NAA30Q147X3 362 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-201ENST00000439765 TPSAB1Q15661 275 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 HIBCHQ6NVY1 386 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-201ENST00000439765 CHST15Q7LFX5 561 aaPredicted RBP17.46■□□□□ 0.39
CCDC188-201ENST00000439765 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
CCDC188-201ENST00000439765 HOOK3Q86VS8 718 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 TRIM39Q9HCM9 518 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 EIF2B3Q9NR50 452 aaKnown RBP17.46■□□□□ 0.39
CCDC188-201ENST00000439765 NCKIPSDQ9NZQ3 722 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 TAAR2Q9P1P5 351 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 ANAPC5Q9UJX4 755 aa17.46■□□□□ 0.39
CCDC188-201ENST00000439765 SMAPO00193 183 aa17.45■□□□□ 0.38
CCDC188-201ENST00000439765 CTIFO43310 598 aaKnown RBP17.45■□□□□ 0.38
CCDC188-201ENST00000439765 GRID2O43424 1007 aa17.45■□□□□ 0.38
CCDC188-201ENST00000439765 NUAK1O60285 661 aa17.45■□□□□ 0.38
CCDC188-201ENST00000439765 SRP72O76094 671 aaKnown RBP17.45■□□□□ 0.38
CCDC188-201ENST00000439765 RPIAP49247 311 aa17.45■□□□□ 0.38
CCDC188-201ENST00000439765 DUSP3P51452 185 aaPredicted RBP17.45■□□□□ 0.38
CCDC188-201ENST00000439765 CDK16Q00536 496 aa17.45■□□□□ 0.38
CCDC188-201ENST00000439765 RTP5Q14D33 572 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms