RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 FAM90A26D6RGX4 464 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF587BE7ETH6 402 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ANKRD28O15084 1053 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ENTPD3O75355 529 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 SELLP14151 372 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 CORO1AP31146 461 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 IL15P40933 162 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 MSH2P43246 934 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 CLDN20P56880 219 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 POU3F1Q03052 451 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 RELQ04864 619 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 EEF1A2Q05639 463 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC20A2Q08357 652 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 CDC16Q13042 620 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZBTB17Q13105 803 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF234Q14588 700 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMEM266Q2M3C6 531 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 GPR139Q6DWJ6 353 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 GFRALQ6UXV0 394 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 C18orf65Q6ZTR6 163 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 TUBA1AQ71U36 451 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 CCDC190Q86UF4 302 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 LINC00346Q8IVM7 164 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ARID3BQ8IVW6 561 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ODF3L1Q8IXM7 274 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 NAGSQ8N159 534 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 SCML4Q8N228 414 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF441Q8N8Z8 693 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ACVR1CQ8NER5 493 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 OR5R1Q8NH85 324 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 LNX1Q8TBB1 728 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 DUSP19Q8WTR2 217 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 SECTM1Q8WVN6 248 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 TUBA1CQ9BQE3 449 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 WWOXQ9NZC7 414 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 KCNS2Q9ULS6 477 aa3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 PTRH2Q9Y3E5 179 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMEM184BQ9Y519 407 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 MAGED1Q9Y5V3 778 aaPredicted RBP3.59□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF644Q9H582 1327 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 A0A1B0GUV1 79 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 CAMTA2O94983 1202 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 ADRB2P07550 413 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 EEF1A1P68104 462 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 TROAPQ12815 778 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMEM35AQ53FP2 167 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 KRTCAP3Q53RY4 240 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 EEF1A1P5Q5VTE0 462 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 NSUN5P2Q63ZY6 315 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 WBP2NLQ6ICG8 309 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC30A6Q6NXT4 461 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF704Q6ZNC4 412 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 SATL1Q86VE3 508 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 EXOC3L1Q86VI1 746 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMEM219Q86XT9 240 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 KMT5CQ86Y97 462 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 MCEMP1Q8IX19 187 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 PM20D2Q8IYS1 436 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 APPL2Q8NEU8 664 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 HMGCLL1Q8TB92 370 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC20A1Q8WUM9 679 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC38A5Q8WUX1 472 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC22A18Q96BI1 424 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 TEX12Q9BXU0 123 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 TXLNGYQ9BZA5 131 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 RETREG1Q9H6L5 497 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 DBNLQ9UJU6 430 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 POU2F3Q9UKI9 436 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 EXO1Q9UQ84 846 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 ARHGEF40Q8TER5 1519 aa3.58□□□□□ -1.84
TRAPPC13-204ENST00000438419 PRSS44E7EML9 344 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 TULP2O00295 520 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 SH2B2O14492 632 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 ADAM20O43506 726 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 NR2F1P10589 423 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 MYOD1P15172 320 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 ITGA2P17301 1181 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 POLR2CP19387 275 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 MRPS5P82675 430 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 PRPF4BQ13523 1007 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 MVPQ14764 893 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 RASA2Q15283 850 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 NTRK2Q16620 822 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 SYT16Q17RD7 645 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 IRAK1BP1Q5VVH5 260 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMEM198Q66K66 360 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 TPRG1Q6ZUI0 275 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 KBTBD6Q86V97 674 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 MAP7D3Q8IWC1 876 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 GCSAMQ8N6F7 178 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 EMC1Q8N766 993 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC38A9Q8NBW4 561 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 CCDC191Q8NCU4 936 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 UTP15Q8TED0 518 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 PPP4R1Q8TF05 950 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 SORCS1Q8WY21 1168 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 DACH2Q96NX9 599 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 PCYT2Q99447 389 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms