RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 DNAJC15Q9Y5T4 150 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 HCFC2Q9Y5Z7 792 aa25.43■■□□□ 1.66
CPNE1-216ENST00000437340 LRRC14BA6NHZ5 514 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 IQCF5A8MTL0 148 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 H0Y3Z8 333 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 BNIP3LO60238 219 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 SNX2O60749 519 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 GPC4O75487 556 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 GCKP35557 465 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 ATP4BP51164 291 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 MAPRE2Q15555 327 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 CRY1Q16526 586 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 LRRC66Q68CR7 880 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 MACC1Q6ZN28 852 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 LARP4Q71RC2 724 aaKnown RBP eCLIP25.42■■□□□ 1.66
CPNE1-216ENST00000437340 ADAMTSL2Q86TH1 951 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 NXPE1Q8N323 547 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 ZNF483Q8TF39 744 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-216ENST00000437340 NUDT4Q9NZJ9 180 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 STX18Q9P2W9 335 aaKnown RBP25.42■■□□□ 1.66
CPNE1-216ENST00000437340 PRPF19Q9UMS4 504 aaKnown RBP25.42■■□□□ 1.66
CPNE1-216ENST00000437340 C15orf41Q9Y2V0 281 aa25.42■■□□□ 1.66
CPNE1-216ENST00000437340 MLYCDO95822 493 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 CHRM1P11229 460 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 CEBPBP17676 345 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 POLR2EP19388 210 aaKnown RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 RGS4P49798 205 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 VASPP50552 380 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 TBL3Q12788 808 aaKnown RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 GPR26Q8NDV2 337 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 NSUN5Q96P11 429 aaKnown RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 PLEKHG4BQ96PX9 1271 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 BOCQ9BWV1 1114 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 LMAN2LQ9H0V9 348 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 ERVW-1Q9UQF0 538 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 MRPS23Q9Y3D9 190 aaKnown RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 WNT6Q9Y6F9 365 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 MYO9BQ13459 2157 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 KRT36O76013 467 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 UGT2B4P06133 528 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 UGT1A6P19224 532 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 UGT1A1P22309 533 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 UGT1A4P22310 534 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 WEE1P30291 646 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 UGT1A3P35503 534 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 UGT1A5P35504 534 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 RECQLP46063 649 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 NUDT2P50583 147 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 HK3P52790 923 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 PTSQ03393 145 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 CDC16Q13042 620 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 RCN1Q15293 331 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 GDPD4Q6W3E5 623 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 Q6ZVU0 165 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.41■■□□□ 1.664e-6■■■□□ 17.2
CPNE1-216ENST00000437340 FBXW8Q8N3Y1 598 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 CELF5Q8N6W0 485 aaKnown RBP25.41■■□□□ 1.66
CPNE1-216ENST00000437340 OR2A12Q8NGT7 310 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 MARK4Q96L34 752 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 BRD9Q9H8M2 597 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 EFCAB1Q9HAE3 211 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 FBXO10Q9UK96 956 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 PCTPQ9UKL6 214 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 MYOFQ9NZM1 2061 aa25.41■■□□□ 1.66
CPNE1-216ENST00000437340 RFXAPO00287 272 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 PPP6CO00743 305 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 AIM2O14862 343 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 CA5AP35218 305 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 TGFBIQ15582 683 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 GEN1Q17RS7 908 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 ZNF697Q5TEC3 545 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 BRAT1Q6PJG6 821 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 MYLK4Q86YV6 388 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-216ENST00000437340 TWIST2Q8WVJ9 160 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 LATS2Q9NRM7 1088 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 CD274Q9NZQ7 290 aa25.4■■□□□ 1.66
CPNE1-216ENST00000437340 DGKAP23743 735 aa25.39■■□□□ 1.66
CPNE1-216ENST00000437340 NSG1P42857 185 aa25.39■■□□□ 1.66
CPNE1-216ENST00000437340 MTTPP55157 894 aa25.39■■□□□ 1.66
CPNE1-216ENST00000437340 IRX1P78414 480 aaPredicted RBP25.39■■□□□ 1.66
CPNE1-216ENST00000437340 TMEM215Q68D42 235 aa25.39■■□□□ 1.66
CPNE1-216ENST00000437340 EFL1Q7Z2Z2 1120 aaKnown RBP25.39■■□□□ 1.66
CPNE1-216ENST00000437340 DSELQ8IZU8 1212 aa25.39■■□□□ 1.66
CPNE1-216ENST00000437340 NUSAP1Q9BXS6 441 aaKnown RBP25.39■■□□□ 1.66
CPNE1-216ENST00000437340 PRSS21Q9Y6M0 314 aa25.39■■□□□ 1.66
CPNE1-216ENST00000437340 A8MX80 341 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 VPS4BO75351 444 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 CD1EP15812 388 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 LHCGRP22888 699 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 NNMTP40261 264 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 NRIP1P48552 1158 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 SLC34A1Q06495 639 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 PTK2BQ14289 1009 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 CCDC6Q16204 474 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 PPP1R3AQ16821 1122 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 DUSP6Q16828 381 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 CHST14Q8NCH0 376 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 OR56A4Q8NGH8 313 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 FRS2Q8WU20 508 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 ING5Q8WYH8 240 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms