RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 GALNT3Q14435 633 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 NR1I3Q14994 352 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 CLCA4Q14CN2 919 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 PDK1Q15118 436 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 PCSK7Q16549 785 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 QPCTQ16769 361 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 PLA2G4EQ3MJ16 856 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 HENMT1Q5T8I9 393 aaKnown RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 PDPK2PQ6A1A2 396 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 CYB5D1Q6P9G0 228 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 IYDQ6PHW0 289 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 LYPD8Q6UX82 237 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 LUZP1Q86V48 1076 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 ARRDC2Q8TBH0 407 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 APOBEC4Q8WW27 367 aaKnown RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 HDAC11Q96DB2 347 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 CXorf40BQ96DE9 158 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 RTP4Q96DX8 246 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 STAMBPL1Q96FJ0 436 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 SLC12A9Q9BXP2 914 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 ULBP3Q9BZM4 244 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 ZCCHC2Q9C0B9 1178 aaKnown RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 KLC4Q9NSK0 619 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 DTLQ9NZJ0 730 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 DNAJC16Q9Y2G8 782 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS50-203ENST00000436177 OAS3Q9Y6K5 1087 aaKnown RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 SPTAN1Q13813 2472 aaKnown RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 SYCE3A1L190 88 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 FADS2P1A8MWK0 482 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 KMOO15229 486 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 SUV39H1O43463 412 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 AKR1B10O60218 316 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 NUAK1O60285 661 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 UBXN7O94888 489 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 EML2O95834 649 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ANKRD34CP0C6C1 535 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 PIRTP0C851 137 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ITGB6P18564 788 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 TCN2P20062 427 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 IL4RP24394 825 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ARL4DP49703 201 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 IFI35P80217 286 aaPredicted RBP7.65□□□□□ -1.18
VPS50-203ENST00000436177 NOTCH2Q04721 2471 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 CDK18Q07002 472 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 PPIDQ08752 370 aaKnown RBP7.65□□□□□ -1.18
VPS50-203ENST00000436177 ABHD18Q0P651 414 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 CDC20Q12834 499 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 TRIM14Q14142 442 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 MESDQ14696 234 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 IQCB1Q15051 598 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 SEPT7Q16181 437 aaKnown RBP7.65□□□□□ -1.18
VPS50-203ENST00000436177 DEFB109BQ30KR1 87 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ATP13A4Q4VNC1 1196 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 C16orf46Q6P387 395 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 KLHL35Q6PF15 583 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ARHGAP22Q7Z5H3 698 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 NT5DC3Q86UY8 548 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 LRRTM4Q86VH4 590 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 PTRH1Q86Y79 214 aaKnown RBP7.65□□□□□ -1.18
VPS50-203ENST00000436177 RFX6Q8HWS3 928 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 TRAPPC5Q8IUR0 188 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 RASGRP3Q8IV61 690 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 RBM12BQ8IXT5 1001 aaKnown RBP7.65□□□□□ -1.18
VPS50-203ENST00000436177 UNC5BQ8IZJ1 945 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 TRAM1L1Q8N609 369 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 FAM71BQ8TC56 605 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 LRRN4Q8WUT4 740 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 STARD8Q92502 1023 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 GLYATL1Q969I3 302 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 FAF2Q96CS3 445 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ZDHHC12Q96GR4 267 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 AGAP3Q96P47 875 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ARHGEF17Q96PE2 2063 aaPredicted RBP7.65□□□□□ -1.18
VPS50-203ENST00000436177 TGM7Q96PF1 710 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 RNF157Q96PX1 679 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 BRD8Q9H0E9 1235 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 TRIM39Q9HCM9 518 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ARFGAP3Q9NP61 516 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 PRDM8Q9NQV8 689 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 FBXO8Q9NRD0 319 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 IFNKQ9P0W0 207 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 PDP2Q9P2J9 529 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ATXN10Q9UBB4 475 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 LNPEPQ9UIQ6 1025 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ANAPC2Q9UJX6 822 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 PILRAQ9UKJ1 303 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 SHOC2Q9UQ13 582 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 ZNF711Q9Y462 761 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 RPS6KL1Q9Y6S9 549 aa7.65□□□□□ -1.18
VPS50-203ENST00000436177 LRRK1Q38SD2 2015 aa7.64□□□□□ -1.19
VPS50-203ENST00000436177 MN1Q10571 1320 aaPredicted RBP7.64□□□□□ -1.19
VPS50-203ENST00000436177 A0A0A6YYK5 440 aaPredicted RBP7.64□□□□□ -1.19
VPS50-203ENST00000436177 A6NCN8 305 aa7.64□□□□□ -1.19
VPS50-203ENST00000436177 ZNF487B1APH4 448 aa7.64□□□□□ -1.19
VPS50-203ENST00000436177 MKRN2OSH3BPM6 223 aa7.64□□□□□ -1.19
VPS50-203ENST00000436177 TOX3O15405 576 aaPredicted RBP7.64□□□□□ -1.19
VPS50-203ENST00000436177 NKX2-8O15522 239 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms