RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 OSGEPL1Q9H4B0 414 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ARFGAP3Q9NP61 516 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF71Q9NQZ8 489 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 RAD18Q9NS91 495 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 EPHA6Q9UF33 1036 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 LCMT1Q9UIC8 334 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 CROTQ9UKG9 612 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 ZNF711Q9Y462 761 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 PCDHGA6Q9Y5G7 932 aa10.78□□□□□ -0.68
SPTLC1P4-201ENST00000435997 VEGFDO43915 354 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 RECKO95980 971 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 FURINP09958 794 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 FGF5P12034 268 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 ZNF7P17097 686 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 BPIP17213 487 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 KDELR1P24390 212 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SSR1P43307 286 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 LEPRP48357 1165 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 FANCCQ00597 558 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 IGFBP7Q16270 282 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 ASTE1Q2TB18 679 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 DEFB109BQ30KR1 87 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 LRRTM4Q86VH4 590 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 RBM12BQ8IXT5 1001 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 CCNYQ8ND76 341 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 DTX3LQ8TDB6 740 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 KLHL6Q8WZ60 621 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 MIB2Q96AX9 1013 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 ZNF830Q96NB3 372 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SLC40A1Q9NP59 571 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 CTTNBP2NLQ9P2B4 639 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SHOC2Q9UQ13 582 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 TP53TG5Q9Y2B4 290 aa10.77□□□□□ -0.69
SPTLC1P4-201ENST00000435997 ZFC3H1O60293 1989 aaKnown RBP10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 OR52A4PA6NMU1 304 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 K7EM74 188 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 AURKAO14965 403 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 KMOO15229 486 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 MTX2O75431 263 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 NDUFA10O95299 355 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 TIAF1O95411 115 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 VIPP01282 170 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 H2AFZP0C0S5 128 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PIRTP0C851 137 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 TYRP1P17643 537 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 NELFEP18615 380 aaKnown RBP10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 DLSTP36957 453 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PMS2P54278 862 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 CDK18Q07002 472 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 FOXM1Q08050 763 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 DMPKQ09013 629 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 LAMB3Q13751 1172 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SEPT6Q14141 434 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 GPR18Q14330 331 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SEPT7Q16181 437 aaKnown RBP10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SLC18A3Q16572 532 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 INSCQ1MX18 579 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PLA2G4EQ3MJ16 856 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 FAM182AQ5T1J6 154 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 TCTN3Q6NUS6 607 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 C16orf46Q6P387 395 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 C6orf15Q6UXA7 325 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 H2AFVQ71UI9 128 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 KDELC2Q7Z4H8 507 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 NT5DC3Q86UY8 548 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 LUZP1Q86V48 1076 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 GALNT6Q8NCL4 622 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 TGM7Q96PF1 710 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 OR6C1Q96RD1 312 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 CEP41Q9BYV8 373 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SLC25A51Q9H1U9 297 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 CBX8Q9HC52 389 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 WDR37Q9Y2I8 494 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 LUC7L2Q9Y383 392 aaKnown RBP10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SPO11Q9Y5K1 396 aa10.76□□□□□ -0.69
SPTLC1P4-201ENST00000435997 FLNCQ14315 2725 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 LRRD1A4D1F6 860 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PDZK1P1A8MUH7 402 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 KIF1CO43896 1103 aaKnown RBP10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 KIAA0754O94854 1291 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 NDST3O95803 873 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 TMEM253P0C7T8 217 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 NR1D1P20393 614 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 RPL10P27635 214 aaKnown RBP10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 HMGCLP35914 325 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 SEPHS1P49903 392 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 UBASH3AP57075 661 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PPP1CAP62136 330 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 KLRB1Q12918 225 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PDK1Q15118 436 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 PRKD1Q15139 912 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 NFKBIBQ15653 356 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 ATP13A5Q4VNC0 1218 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 CAVIN1Q6NZI2 390 aaKnown RBP10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 APLFQ8IW19 511 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 TRIM48Q8IWZ4 208 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 GPR150Q8NGU9 434 aa10.75□□□□□ -0.69
SPTLC1P4-201ENST00000435997 CTNNBL1Q8WYA6 563 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms