RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZNF540Q8NDQ6 660 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 TEX37Q96LM6 180 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 SNX18Q96RF0 628 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 PDCD2LQ9BRP1 358 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 RIBC2Q9H4K1 309 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 H0YCG3 227 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 PTGS2P35354 604 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 HK2P52789 917 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 FOXA1P55317 472 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 DEFA1P59665 94 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 DEFA3P59666 94 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 MCCD1P59942 119 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 CLCA4Q14CN2 919 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 SULT1C3Q6IMI6 304 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 CYHR1Q6ZMK1 362 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 GLB1L3Q8NCI6 653 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 UBE2FQ969M7 185 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 TMEM125Q96AQ2 219 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 MYOCQ99972 504 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 DHRS9Q9BPW9 319 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 TBCDQ9BTW9 1192 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 KLHL31Q9H511 634 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 EML4Q9HC35 981 aaKnown RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 EHD3Q9NZN3 535 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 OPTCQ9UBM4 332 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 INTS6Q9UL03 887 aaKnown RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 PHLPP1O60346 1717 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 CNTN5O94779 1100 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 NFICP08651 508 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 SLAMF1Q13291 335 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 RAPSNQ13702 412 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 TWF2Q6IBS0 349 aaKnown RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 ESRP1Q6NXG1 681 aaKnown RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 SYCE2Q6PIF2 218 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 LDB1Q86U70 411 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 PSTKQ8IV42 348 aaKnown RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 SDR16C5Q8N3Y7 309 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 BTN2A3PQ96KV6 586 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 PHOX2BQ99453 314 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 MEAF6Q9HAF1 191 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 MID1IP1Q9NPA3 183 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 IPPQ9Y573 584 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 LOC100130705A0A1B0GUX0 176 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 RGS5O15539 181 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 NPHS1O60500 1241 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 GJB1P08034 283 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 PCMT1P22061 227 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 MASP1P48740 699 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 PITX1P78337 314 aaPredicted RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 TP53BP2Q13625 1128 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 SLX4IPQ5VYV7 408 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 LARP4Q71RC2 724 aaKnown RBP eCLIP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 KRT73Q86Y46 540 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 TCAIMQ8N3R3 496 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 ESX1Q8N693 406 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 TAS2R9Q9NYW1 312 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 SLC2A6Q9UGQ3 507 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 SHANK3Q9BYB0 1731 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 SYNDIG1LA6NDD5 238 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 AGAP5A6NIR3 686 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 IPO13O94829 963 aaKnown RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 C7P10643 843 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 MRPL28Q13084 256 aaKnown RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 AMHR2Q16671 573 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 BRMS1LQ5PSV4 323 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 VARS2Q5ST30 1063 aaKnown RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 ANGPTL8Q6UXH0 198 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 AHSA2Q719I0 299 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 LRRC71Q8N4P6 559 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 ST13P5Q8NFI4 369 aaPredicted RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 PHF10Q8WUB8 498 aaKnown RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 BTBD2Q9BX70 525 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 MKRN2Q9H000 416 aaKnown RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 FAM49AQ9H0Q0 323 aaPredicted RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 KAT8Q9H7Z6 458 aaKnown RBP7.4□□□□□ -1.23
CPSF6-202ENST00000435070 FBXL12Q9NXK8 326 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 KCNN3Q9UGI6 736 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 DNMT3LQ9UJW3 386 aa7.4□□□□□ -1.23
CPSF6-202ENST00000435070 TCRBV5S2A0A599 114 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ISPDA4D126 451 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 SNTNA6NMZ2 147 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 NFKB1P19838 968 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 WEE1P30291 646 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 GGT5P36269 586 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 NR2C2P49116 596 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CXCR3P49682 368 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 BAATQ14032 418 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 C15orf52Q6ZUT6 534 aaKnown RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 SLC7A14Q8TBB6 771 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ISL2Q96A47 359 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PYCR2Q96C36 320 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ZSCAN5AQ9BUG6 496 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 COA1Q9GZY4 146 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 MMP28Q9H239 520 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 NECTIN3Q9NQS3 549 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 NFKBIL1Q9UBC1 381 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ANKRD6Q9Y2G4 727 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 DNMT3AQ9Y6K1 912 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 OAS3Q9Y6K5 1087 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms