RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 WNT8BQ93098 351 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 BIRC7Q96CA5 298 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SMARCD1Q96GM5 515 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 MYRFLQ96LU7 910 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 GPR22Q99680 433 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 PRRG3Q9BZD7 231 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 RNF39Q9H2S5 420 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SEMA4BQ9NPR2 832 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 COMMD8Q9NX08 183 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 KIF17Q9P2E2 1029 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FBXO5Q9UKT4 447 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 BTBD3Q9Y2F9 522 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ARIH1Q9Y4X5 557 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 A8MT66 165 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 PIP5K1BO14986 540 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SLC22A1O15245 554 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 MTSS1O43312 755 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 DUSP11O75319 330 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 PGLSO95336 258 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 F2P00734 622 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 FYNP06241 537 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ERCC2P18074 760 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 MATKP42679 507 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 LILRA4P59901 499 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 DPYSL2Q16555 572 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 RBBP7Q16576 425 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ARMC4Q5T2S8 1044 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 OTOP3Q7RTS5 596 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 LDB1Q86U70 411 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 HS3ST5Q8IZT8 346 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 TMEM86AQ8N2M4 240 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 PTGR2Q8N8N7 351 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 LEMD2Q8NC56 503 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SPATA22Q8NHS9 363 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CSF3RQ99062 836 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 TMEM246Q9BRR3 403 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 TDRD1Q9BXT4 1180 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 NUAK2Q9H093 628 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 GPN2Q9H9Y4 310 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SP110Q9HB58 689 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 EXOSC4Q9NPD3 245 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 RASSF1Q9NS23 344 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CMTM6Q9NX76 183 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 AASSQ9UDR5 926 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 USP22Q9UPT9 525 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CRYL1Q9Y2S2 319 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 TIMM22Q9Y584 194 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 UBA6A0AVT1 1052 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 BBIP1A8MTZ0 92 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 M0QX08 132 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 DYRK3O43781 588 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 TSC22D2O75157 780 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CYP7B1O75881 506 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SEC14L2O76054 403 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 RECQL5O94762 991 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ALDH1A1P00352 501 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 LTA4HP09960 611 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 POLR2EP19388 210 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 PTPN3P26045 913 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 KRT6CP48668 564 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 GRSF1Q12849 480 aaKnown RBP eCLIP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SOWAHAQ2M3V2 549 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SPANXN2Q5MJ10 180 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 RBM48Q5RL73 367 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 TBPL2Q6SJ96 375 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CCBE1Q6UXH8 406 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 PRR23CQ6ZRP0 262 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 LRRC8DQ7L1W4 858 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 HORMAD1Q86X24 394 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 GALNT12Q8IXK2 581 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CENPLQ8N0S6 344 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 DCBLD1Q8N8Z6 715 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CNIH3Q8TBE1 160 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ADAMTS16Q8TE57 1224 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 EMID1Q96A84 441 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 PABPC5Q96DU9 382 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SEPT5Q99719 369 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SPON2Q9BUD6 331 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 DUSP16Q9BY84 665 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 GMIPQ9P107 970 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 EVLQ9UI08 416 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 TPRKBQ9Y3C4 175 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 GPSM3Q9Y4H4 160 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ZCWPW2A0A1B0GU75 182 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 KRT87PA6NCN2 255 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 JRKO75564 520 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 SIX3O95343 332 aaPredicted RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 IFI30P13284 250 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CAPN3P20807 821 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 GSTM2P28161 218 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 CD40LGP29965 261 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 LEPRP48357 1165 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ALDH7A1P49419 539 aaKnown RBP7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ALDH3A2P51648 485 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 ARHGDIAP52565 204 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 OR2B6P58173 313 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 MTPNP58546 118 aa7.35□□□□□ -1.23
SYNPO2-203ENST00000434046 KCNAB2Q13303 367 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms