RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 FNDC5Q8NAU1 212 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 RHOXF1Q8NHV9 184 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 LGALS12Q96DT0 336 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 MBOAT4Q96T53 435 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 VAT1Q99536 393 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 RBM22Q9NW64 420 aaKnown RBP eCLIP11.45□□□□□ -0.587e-11■■■■□ 25.4
HMGCS1-202ENST00000433297 MGAMO43451 1857 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 SHROOM3Q8TF72 1996 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 UBR3Q6ZT12 1888 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 DYTNA2CJ06 578 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 EIF3FO00303 357 aaPredicted RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 GOT2P00505 430 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ANXA6P08133 673 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 USP17L7P0C7H9 530 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 INSRRP14616 1297 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 PRDX3P30048 256 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 AAK1Q2M2I8 961 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ATPAF2Q8N5M1 289 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 PAPD5Q8NDF8 572 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 PIK3C3Q8NEB9 887 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 NCLNQ969V3 563 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 GMLQ99445 158 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 RGS18Q9NS28 235 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ZNF639Q9UID6 485 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 DYRK3O43781 588 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 MITFO75030 526 aaPredicted RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ANXA9O76027 345 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 GABARAPO95166 117 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 MYL3P08590 195 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ITIH1P19827 911 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 DNAJB1P25685 340 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 POLD2P49005 469 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ST13P50502 369 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 DGKQP52824 942 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ATP6AP1LQ52LC2 224 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 GJC2Q5T442 439 aaPredicted RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 DENND5AQ6IQ26 1287 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 BNIPLQ7Z465 357 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 PTRH1Q86Y79 214 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 LRRC49Q8IUZ0 686 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ZNF540Q8NDQ6 660 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 PPP1R13LQ8WUF5 828 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 LRRC3Q9BY71 257 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 RIBC2Q9H4K1 309 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 COMMD8Q9NX08 183 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 PGAP2Q9UHJ9 254 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 GPR45Q9Y5Y3 372 aa11.45□□□□□ -0.58
HMGCS1-202ENST00000433297 LINC00854A0A1B0GVQ3 168 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PGLSO95336 258 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PCMT1P22061 227 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 EEFSECP57772 596 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 MAXP61244 160 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 NRG1Q02297 640 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 RAPSNQ13702 412 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CELF3Q5SZQ8 465 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 FKBP1CQ5VVH2 108 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 LAIR2Q6ISS4 152 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 RIMKLAQ8IXN7 391 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 BEST2Q8NFU1 509 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PROX1Q92786 737 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ZFYVE19Q96K21 471 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CDK5RAP1Q96SZ6 601 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 MOV10Q9HCE1 1003 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CPNE5Q9HCH3 593 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 RASSF1Q9NS23 344 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 THG1LQ9NWX6 298 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ADGRE2Q9UHX3 823 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 TESMINQ9Y4I5 508 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ORC6Q9Y5N6 252 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 TTC34A8MYJ7 566 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PRMT5O14744 637 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 UPK1BO75841 260 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 GALNT1Q10472 559 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CBX2Q14781 532 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 SMN1Q16637 294 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 FBXO47Q5MNV8 452 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CCBE1Q6UXH8 406 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 UNC93AQ86WB7 457 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PHYKPLQ8IUZ5 450 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 TMEM199Q8N511 208 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 APPL2Q8NEU8 664 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 FAM162AQ96A26 154 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 SLC10A4Q96EP9 437 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 UBXN10Q96LJ8 280 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CARS2Q9HA77 564 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 GLOD4Q9HC38 313 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 MAGEE1Q9HCI5 957 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 TRIM39Q9HCM9 518 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 TSR3Q9UJK0 312 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 INTS6Q9UL03 887 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 UGT2A1Q9Y4X1 527 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 LY75O60449 1722 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ZNF638Q14966 1978 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 SCN1AP35498 2009 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PDZK1P1A8MUH7 402 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms