RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 MATR3P43243 847 aaKnown RBP eCLIP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 CLCNKBP51801 687 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 SUMO3P55854 103 aaPredicted RBP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 GSDMDP57764 484 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 POLR2FP61218 127 aaKnown RBP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 CCZ1BP86790 482 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 CCZ1P86791 482 aaPredicted RBP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 CCDC173Q0VFZ6 552 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 CETN1Q12798 172 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 SLC14A1Q13336 389 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 PDXDC1Q6P996 788 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 DCLRE1AQ6PJP8 1040 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 ADGRD2Q7Z7M1 963 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 TMEM173Q86WV6 379 aaPredicted RBP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 LRRC8AQ8IWT6 810 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 CRYBG2Q8N1P7 616 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 LRRC43Q8N309 656 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 SUMF1Q8NBK3 374 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 ZNF548Q8NEK5 533 aaPredicted RBP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 OR8K1Q8NGG5 319 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 HPDLQ96IR7 371 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 FAM81BQ96LP2 452 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 APOL6Q9BWW8 343 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 MRPL9Q9BYD2 267 aaKnown RBP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 SACM1LQ9NTJ5 587 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 ABHD10Q9NUJ1 306 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 DNAJB4Q9UDY4 337 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 NOCTQ9UK39 431 aaKnown RBP5.68□□□□□ -1.5
C9orf3-205ENST00000427193 DNAJC12Q9UKB3 198 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 L1RE1Q9UN81 338 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 PCDHB7Q9Y5E2 793 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 DMXL2Q8TDJ6 3036 aa5.68□□□□□ -1.5
C9orf3-205ENST00000427193 LRRC53A6NM62 1247 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 KPNA7A9QM74 516 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 AKR1B15C9JRZ8 316 aaPredicted RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 PODXLO00592 558 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 CRYABP02511 175 aaKnown RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 TPM2P07951 284 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 CHRNB2P17787 502 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 TRIM21P19474 475 aaKnown RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 TYMPP19971 482 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 WARSP23381 471 aaKnown RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 ADRA1DP25100 572 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 DNAJB1P25685 340 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 ANXA13P27216 316 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 KRT9P35527 623 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 NRIP1P48552 1158 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 RPL34P49207 117 aaKnown RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 SLC11A1P49279 550 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 TAF6P49848 677 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 RAD23BP54727 409 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 BIRC3Q13489 604 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 DRAP1Q14919 205 aaPredicted RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 ZNF699Q32M78 642 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 RRAGAQ7L523 313 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 CCDC186Q7Z3E2 898 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 UNC93AQ86WB7 457 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 SLC39A11Q8N1S5 342 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 PDCL2Q8N4E4 241 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 TTC39CQ8N584 583 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 VN1R2Q8NFZ6 395 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 NEK11Q8NG66 645 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 TWNKQ96RR1 684 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 ELOVL4Q9GZR5 314 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 S1PR5Q9H228 398 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 FAM83DQ9H4H8 585 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 SMYD3Q9H7B4 428 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 UBE2TQ9NPD8 197 aaPredicted RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 CISHQ9NSE2 258 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 CPNE7Q9UBL6 633 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 CACNG4Q9UBN1 327 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 HMGXB4Q9UGU5 601 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 AFF4Q9UHB7 1163 aaKnown RBP5.67□□□□□ -1.5
C9orf3-205ENST00000427193 STEAP1Q9UHE8 339 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 RIMKLBQ9ULI2 386 aa5.67□□□□□ -1.5
C9orf3-205ENST00000427193 MYO18BQ8IUG5 2567 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 WDFY3Q8IZQ1 3526 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 CASTOR2A6NHX0 329 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 AQP7P3A6NL99 342 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 B4DGG1 531 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 ZNF263O14978 683 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 SYN3O14994 580 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 B3GAT3O94766 335 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 GFPT2O94808 682 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 CSPG5O95196 566 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 PAEPP09466 180 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 PDGFRBP09619 1106 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 WEE2P0C1S8 567 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 PNMA6AP0CW24 399 aaPredicted RBP5.66□□□□□ -1.5
C9orf3-205ENST00000427193 SRGAP2BP0DMP2 458 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 BRAFP15056 766 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 SP100P23497 879 aaPredicted RBP5.66□□□□□ -1.5
C9orf3-205ENST00000427193 ACVR2AP27037 513 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 CDH5P33151 784 aaPredicted RBP5.66□□□□□ -1.5
C9orf3-205ENST00000427193 PIK3CAP42336 1068 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 HTR6P50406 440 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 ITGA8P53708 1063 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 MFAP3P55082 362 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 CDH8P55286 799 aa5.66□□□□□ -1.5
C9orf3-205ENST00000427193 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms