RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DUPD1Q68J44 220 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 NUP54Q7Z3B4 507 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 TMEM161BQ8NDZ6 487 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 HTATIP2Q9BUP3 242 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 DNAJB4Q9UDY4 337 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 RPL36Q9Y3U8 105 aaKnown RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 L7N2F9 121 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 SPTLC1O15269 473 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ITPKBP27987 946 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 AKT2P31751 481 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 MAGEA12P43365 314 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ACADVLP49748 655 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 VAMP2P63027 116 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 IKBKEQ14164 716 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 FUCA2Q9BTY2 467 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 FBXO5Q9UKT4 447 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 EPCAMP16422 314 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 DPEP1P16444 411 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 UBA1P22314 1058 aaKnown RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 HOXC8P31273 242 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 UNC5BQ8IZJ1 945 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ZSWIM3Q96MP5 696 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 KAT8Q9H7Z6 458 aaKnown RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 KIAA1522Q9P206 1035 aaPredicted RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 TSPAN4O14817 238 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 OR7A10O76100 309 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 IFNA21P01568 189 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 CDK18Q07002 472 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 RBM48Q5RL73 367 aaKnown RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 C9orf64Q5T6V5 341 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 KCTD15Q96SI1 283 aaPredicted RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 PDCD2LQ9BRP1 358 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 TMEM168Q9H0V1 697 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 TNKS2Q9H2K2 1166 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 MFSD1Q9H3U5 465 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 TCF7L1Q9HCS4 588 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 FANCFQ9NPI8 374 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 PLK2Q9NYY3 685 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 RECQL4O94761 1208 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 PSEN2P49810 448 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 MAPK14Q16539 360 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 FAM183BPQ6ZVS7 135 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 SLC44A3Q8N4M1 653 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 CHST4Q8NCG5 386 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 TAPBPLQ9BX59 468 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF490Q9ULM2 529 aaPredicted RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ASF1AQ9Y294 204 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 GSC2O15499 205 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ERAL1O75616 437 aaKnown RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 SLC25A14O95258 325 aaPredicted RBP14.33□□□□□ -0.12
PTPN13-203ENST00000427191 EPHX2P34913 555 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 SLC1A2P43004 574 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ECT2LQ008S8 904 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 PLEKHG4Q58EX7 1191 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 C16orf46Q6P387 395 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 GALNTL5Q7Z4T8 443 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 OR52K2Q8NGK3 314 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 CEP76Q8TAP6 659 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 FERD3LQ96RJ6 166 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ULBP1Q9BZM6 244 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF451Q9Y4E5 1061 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 FKBP7Q9Y680 259 aa14.33□□□□□ -0.12
PTPN13-203ENST00000427191 MYH15Q9Y2K3 1946 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 ADH1AP07327 375 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 GNAZP19086 355 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 APLP1P51693 650 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 VMACQ2NL98 169 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 DNAAF5Q86Y56 855 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 PIGKQ92643 395 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 NUSAP1Q9BXS6 441 aaKnown RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 ILVBLA1L0T0 632 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 NOL4O94818 638 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 SLITRK3O94933 977 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 VARSP26640 1264 aaKnown RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 FKBP1AP62942 108 aaKnown RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 DET1Q7L5Y6 550 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 FETUBQ9UGM5 382 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 CACNG1Q06432 222 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 HEPACAMQ14CZ8 416 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 GLYATQ6IB77 296 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 ADAM32Q8TC27 787 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 TMEM5Q9Y2B1 443 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 F8VP50 259 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 TIGD2Q4W5G0 525 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 CCSAPQ6IQ19 270 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 LHX5Q9H2C1 402 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 PHPT1Q9NRX4 125 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF282Q9UDV7 671 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 NRXN1Q9ULB1 1477 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF3P17036 446 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 PDCD4Q53EL6 469 aaKnown RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 FKBP1CQ5VVH2 108 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 ZYG11AQ6WRX3 759 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 TTLQ8NG68 377 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 NR4A3Q92570 626 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 CLIP3Q96DZ5 547 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 TBC1D14Q9P2M4 693 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms