RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 CAB39Q9Y376 341 aaPredicted RBP13.37□□□□□ -0.27
LRCH3-203ENST00000425562 TMED5Q9Y3A6 229 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 TBX1O43435 398 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 SNX2O60749 519 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
LRCH3-203ENST00000425562 RBP1P09455 135 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 HSD17B1P14061 328 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 IL12AP29459 219 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 KPNA2P52292 529 aaKnown RBP13.37□□□□□ -0.27
LRCH3-203ENST00000425562 BNIP2Q12982 314 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 SMN1Q16637 294 aaKnown RBP13.37□□□□□ -0.27
LRCH3-203ENST00000425562 MILR1Q7Z6M3 343 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 LINC00523Q86TU6 105 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 DCP1BQ8IZD4 617 aaKnown RBP13.37□□□□□ -0.27
LRCH3-203ENST00000425562 SLC22A15Q8IZD6 547 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 TBATAQ96M53 351 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 TINF2Q9BSI4 451 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 MROQ9BYG7 248 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 SLC39A8Q9C0K1 460 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 SMOC2Q9H3U7 446 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 INTS10Q9NVR2 710 aaKnown RBP13.37□□□□□ -0.27
LRCH3-203ENST00000425562 LIMD1Q9UGP4 676 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 DERAQ9Y315 318 aa13.37□□□□□ -0.27
LRCH3-203ENST00000425562 COL1A2P08123 1366 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 CCL15-CCL14A0A0B4J2E2 113 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 A8MV72 311 aaPredicted RBP13.36□□□□□ -0.27
LRCH3-203ENST00000425562 FADS2O95864 444 aaKnown RBP13.36□□□□□ -0.27
LRCH3-203ENST00000425562 GPIP06744 558 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 CCR1P32246 355 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 CD86P42081 329 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 PIK3CGP48736 1102 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 DAOAP59103 153 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 DAG1Q14118 895 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 CCL15Q16663 113 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 USP51Q70EK9 711 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 ZDHHC13Q8IUH4 622 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 TBC1D21Q8IYX1 336 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 MINDY1Q8N5J2 469 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 FNDC5Q8NAU1 212 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 SCAMP5Q8TAC9 235 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 FKBP10Q96AY3 582 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 MIOSQ9NXC5 875 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 GDAP2Q9NXN4 497 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 ERVK-18Q9QC07 812 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 A0A0U1RQS6 177 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 TRIM64A6NGJ6 449 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 PFDN6O15212 129 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 GOT2P00505 430 aaKnown RBP13.36□□□□□ -0.27
LRCH3-203ENST00000425562 PAMP19021 973 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 GTF2E2P29084 291 aaKnown RBP13.36□□□□□ -0.27
LRCH3-203ENST00000425562 PGFP49763 221 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 NEK2P51955 445 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 NKG7Q16617 165 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 ARL13BQ3SXY8 428 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 THOC7Q6I9Y2 204 aaKnown RBP13.36□□□□□ -0.27
LRCH3-203ENST00000425562 TAF2Q6P1X5 1199 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 BLOC1S3Q6QNY0 202 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 SPATC1Q76KD6 591 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 ANKRD13BQ86YJ7 626 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 SCML4Q8N228 414 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 CDYL2Q8N8U2 506 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 CHDHQ8NE62 594 aaPredicted RBP13.36□□□□□ -0.27
LRCH3-203ENST00000425562 BLOC1S5Q8TDH9 187 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 MRGPRX2Q96LB1 330 aa13.36□□□□□ -0.27
LRCH3-203ENST00000425562 G3V2T6 193 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 NDUFS2O75306 463 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 CST1P01037 141 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 ALPLP05186 524 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 HERVK_113P63132 956 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 GRSF1Q12849 480 aaKnown RBP eCLIP13.35□□□□□ -0.27
LRCH3-203ENST00000425562 CTF1Q16619 201 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 TAC4Q86UU9 113 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 UBE2FQ969M7 185 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 NT5C3BQ969T7 300 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 NCLNQ969V3 563 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 SMIM14Q96QK8 99 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 NODALQ96S42 347 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 CYP2S1Q96SQ9 504 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 ERVK-6Q9BXR3 956 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 TMEM9Q9P0T7 183 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 FBXO10Q9UK96 956 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 IKZF3Q9UKT9 509 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 AAR2Q9Y312 384 aaKnown RBP13.35□□□□□ -0.27
LRCH3-203ENST00000425562 LINC00854A0A1B0GVQ3 168 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 IQCA1LA6NCM1 817 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 KATNA1O75449 491 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 DIRAS1O95057 198 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 RPL34P49207 117 aaKnown RBP13.35□□□□□ -0.27
LRCH3-203ENST00000425562 DSC2Q02487 901 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 KCNC4Q03721 635 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 MFSD10Q14728 455 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 RBBP7Q16576 425 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 SYT16Q17RD7 645 aa13.35□□□□□ -0.27
LRCH3-203ENST00000425562 COLEC12Q5KU26 742 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms