RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MINDY3Q9H8M7 445 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 MID1IP1Q9NPA3 183 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 SHROOM3Q8TF72 1996 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 XIRP2A4UGR9 3374 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 CDK2AP1O14519 115 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 IPO13O94829 963 aaKnown RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 CYBBP04839 570 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 RBP1P09455 135 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF37AP17032 561 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ALDH3A2P51648 485 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 DAG1Q14118 895 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 TJAP1Q5JTD0 557 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 SYPL2Q5VXT5 272 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 SDE2Q6IQ49 451 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ABHD15Q6UXT9 468 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 TMEM179BQ7Z7N9 219 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ZDHHC13Q8IUH4 622 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 LACC1Q8IV20 430 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 HID1Q8IV36 788 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 DYNC2LI1Q8TCX1 351 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 RASSF5Q8WWW0 418 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 PROX1Q92786 737 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 TMEM125Q96AQ2 219 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 C12orf10Q9HB07 376 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 FEM1BQ9UK73 627 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 SNX8Q9Y5X2 465 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 GJA3Q9Y6H8 435 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 DNMT3AQ9Y6K1 912 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ARID2Q68CP9 1835 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 PPEF2O14830 753 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 IQCF3P0C7M6 154 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 CBLP22681 906 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ATP5F1P24539 256 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 IL12AP29459 219 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ARL2P36404 184 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 NR2C2P49116 596 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 UFM1P61960 85 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 DAB2P98082 770 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 GHRHRQ02643 423 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 RAPSNQ13702 412 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ZFP69Q49AA0 526 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 CDONQ4KMG0 1287 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 GPR158Q5T848 1215 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ARHGAP36Q6ZRI8 547 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 LSMEM1Q8N8F7 131 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 RNF139Q8WU17 664 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 MBOAT4Q96T53 435 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 MRPL45Q9BRJ2 306 aaKnown RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 MRPL4Q9BYD3 311 aaKnown RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 FKBP14Q9NWM8 211 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 MID2Q9UJV3 735 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 OAS3Q9Y6K5 1087 aaKnown RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 NUP214P35658 2090 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 NCF1BA6NI72 391 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 NCF1CA8MVU1 366 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 FZD9O00144 591 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 TBC1D4O60343 1298 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 RECQL5O94762 991 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 PRSS23O95084 383 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 APOA4P06727 396 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 NCF1P14598 390 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 CLK1P49759 484 aaKnown RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 SNRPD2P62316 118 aaKnown RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 NPTX1Q15818 432 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 AASDHQ4L235 1098 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 VARS2Q5ST30 1063 aaKnown RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 NBPF12Q5TAG4 269 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 SLC26A9Q7LBE3 791 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 FBXO8Q9NRD0 319 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 HACL1Q9UJ83 578 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 SPEF1Q9Y4P9 236 aa11.2□□□□□ -0.62
SEC61A1-202ENST00000424880 ASPDHA6ND91 283 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 C16orf96A6NNT2 1141 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 PRMT5O14744 637 aaPredicted RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CPNE3O75131 537 aaKnown RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 AP2A1O95782 977 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CST1P01037 141 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 EPHA2P29317 976 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CD6P30203 668 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 OR2B6P58173 313 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CYP4F2P78329 520 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CYP4F3Q08477 520 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 NKG7Q16617 165 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 TBC1D21Q8IYX1 336 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 MIER2Q8N344 545 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 NPWQ8N729 165 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 OR6F1Q8NGZ6 308 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CCDC120Q96HB5 630 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF717Q9BY31 904 aaPredicted RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CLPBQ9H078 707 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 C8orf4Q9NR00 106 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 MAT2BQ9NZL9 334 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 GMIPQ9P107 970 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 AGO1Q9UL18 857 aaKnown RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CRYL1Q9Y2S2 319 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 NME7Q9Y5B8 376 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 PCDHA9Q9Y5H5 950 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 A0A0X1KG70 313 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms