RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SLC39A1Q9NY26 324 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 OGFRQ9NZT2 677 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 SCHIP1Q9P0W5 487 aaPredicted RBP12.82□□□□□ -0.36
VRK3-203ENST00000424804 SLC23A2Q9UGH3 650 aa12.82□□□□□ -0.36
VRK3-203ENST00000424804 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 C1orf232A0A0U1RR37 186 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 GOLGA6L9A6NEM1 432 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 EFCAB7A8K855 629 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 MIF4GDA9UHW6 222 aaKnown RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 NUAK1O60285 661 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 TJP3O95049 919 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 PYGLP06737 847 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 CCDC175P0C221 793 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 RBL1P28749 1068 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 UBE2IP63279 158 aaKnown RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 KCNC4Q03721 635 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 PEX6Q13608 980 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 NOMO1Q15155 1222 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 ZNF648Q5T619 568 aaPredicted RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 TMEM164Q5U3C3 297 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 CCDC70Q6NSX1 233 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 DARS2Q6PI48 645 aaKnown RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 WDR74Q6RFH5 385 aaPredicted RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 CHST15Q7LFX5 561 aaPredicted RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 GPR26Q8NDV2 337 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 IMP4Q96G21 291 aaKnown RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 FERMT1Q9BQL6 677 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 MLPHQ9BV36 600 aaPredicted RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 ADGRE3Q9BY15 652 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 TRIM4Q9C037 500 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 FAM83DQ9H4H8 585 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 APMAPQ9HDC9 416 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 AKAP7Q9P0M2 348 aaPredicted RBP12.81□□□□□ -0.36
VRK3-203ENST00000424804 ATXN10Q9UBB4 475 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 IL17BQ9UHF5 180 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 ZNHIT2Q9UHR6 403 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 TMPRSS11EQ9UL52 423 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 KCNK6Q9Y257 313 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 PCDHB11Q9Y5F2 797 aa12.81□□□□□ -0.36
VRK3-203ENST00000424804 LOC101059948A0A1B0GTJ6 334 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 RGSL1A5PLK6 1076 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 HACD1B0YJ81 288 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 CHUKO15111 745 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
VRK3-203ENST00000424804 KCNN4O15554 427 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 ZW10O43264 779 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 MTSS1O43312 755 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 RAD1O60671 282 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 ASMTLO95671 621 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 RBP3P10745 1247 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 ZNF8P17098 575 aaPredicted RBP12.8□□□□□ -0.36
VRK3-203ENST00000424804 CSTF2P33240 577 aaKnown RBP eCLIP12.8□□□□□ -0.36
VRK3-203ENST00000424804 CSRP3P50461 194 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 CLCNKAP51800 687 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 HHEXQ03014 270 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 WASHC5Q12768 1159 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 SEL1L2Q5TEA6 688 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 LYSMD3Q7Z3D4 306 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 TMC3Q7Z5M5 1100 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 ADGRG6Q86SQ4 1221 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 CDKL3Q8IVW4 592 aaPredicted RBP12.8□□□□□ -0.36
VRK3-203ENST00000424804 CACNA2D3Q8IZS8 1091 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 ZNF567Q8N184 647 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 SLC25A41Q8N5S1 370 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
VRK3-203ENST00000424804 TEKT5Q96M29 485 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 SLC38A3Q99624 504 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 TBC1D10AQ9BXI6 508 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 RMI1Q9H9A7 625 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 ARFGAP3Q9NP61 516 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 FBXO8Q9NRD0 319 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 SIDT1Q9NXL6 827 aaKnown RBP12.8□□□□□ -0.36
VRK3-203ENST00000424804 DNPEPQ9ULA0 475 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 SHOC2Q9UQ13 582 aa12.8□□□□□ -0.36
VRK3-203ENST00000424804 ZNF106Q9H2Y7 1883 aaKnown RBP12.8□□□□□ -0.36
VRK3-203ENST00000424804 A8MU76 341 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 NKX2-8O15522 239 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 GRID2O43424 1007 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 DUX1O43812 170 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 STK10O94804 968 aaKnown RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 ACP5P13686 325 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 CD68P34810 354 aaPredicted RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 CCZ1BP86790 482 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 CCZ1P86791 482 aaPredicted RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 CDK18Q07002 472 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 XRCC4Q13426 336 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 NFATC2Q13469 925 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 KHDC1Q4VXA5 237 aaKnown RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 PRICKLE2Q7Z3G6 844 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 ZNF547Q8IVP9 402 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 ZSCAN1Q8NBB4 408 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 IPMKQ8NFU5 416 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 CCHCR1Q8TD31 782 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 COL26A1Q96A83 441 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 SLC45A3Q96JT2 553 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 PLEKHG4BQ96PX9 1271 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 ALS2CR12Q96Q35 445 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 CTRCQ99895 268 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms