RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DDHD1Q8NEL9 900 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 OR4L1Q8NH43 312 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 SAP25Q8TEE9 199 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 NAT14Q8WUY8 206 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 IFT81Q8WYA0 676 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 SEC14L1Q92503 715 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF669Q96BR6 464 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ULK4Q96C45 1275 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 SCARF2Q96GP6 870 aaPredicted RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 TTC25Q96NG3 672 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 EBNA1BP2Q99848 306 aaKnown RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 RHOXF2Q9BQY4 288 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 LRRC61Q9BV99 259 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 TMEM168Q9H0V1 697 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 SPASTQ9UBP0 616 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 APOBEC3BQ9UH17 382 aaKnown RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ZNHIT2Q9UHR6 403 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 GPSM3Q9Y4H4 160 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 RPS6KL1Q9Y6S9 549 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 ASCC3Q8N3C0 2202 aaKnown RBP9.17□□□□□ -0.94
PDGFC-202ENST00000422544 PCNX2A6NKB5 2137 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 MAST4O15021 2626 aa9.17□□□□□ -0.94
PDGFC-202ENST00000422544 TENM4Q6N022 2769 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 PCDH15Q96QU1 1955 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 TRBV5-4A0A0C4DH59 114 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ZCWPW2A0A1B0GU75 182 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 BHMG1C9JSJ3 638 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 TM4SF5O14894 197 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CD3EAPO15446 510 aaKnown RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 YKT6O15498 198 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 FFAR2O15552 330 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 GRID2O43424 1007 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 VEGFDO43915 354 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 NUAK1O60285 661 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 PCDHGA12O60330 932 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 USP1O94782 785 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CELA2BP08218 269 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF883P0CG24 379 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CD59P13987 128 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 PGAM1P18669 254 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 PAMP19021 973 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 MSH3P20585 1137 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ACRV1P26436 265 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 AKT1P31749 480 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ARCN1P48444 511 aaKnown RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 LIMK1P53667 647 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ARHGAP8P85298 464 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 B4GALNT1Q00973 533 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CAV1Q03135 178 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 SLC14A1Q13336 389 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 GTF2H3Q13889 308 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 SEMA3AQ14563 771 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 SUZ12Q15022 739 aaKnown RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 DBN1Q16643 649 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 PYCR3Q53H96 274 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 FASTKD1Q53R41 847 aaKnown RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CRTC3Q6UUV7 619 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 DBX2Q6ZNG2 339 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CENPUQ71F23 418 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 DET1Q7L5Y6 550 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 KANSL1Q7Z3B3 1105 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 LDB1Q86U70 411 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 GALNT13Q8IUC8 556 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF548Q8NEK5 533 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CCL4L1Q8NHW4 92 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 FBXO25Q8TCJ0 367 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 NETO1Q8TDF5 533 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 SETD7Q8WTS6 366 aaKnown RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 SGF29Q96ES7 293 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CCDC97Q96F63 343 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CFAP36Q96G28 342 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 DCUN1D1Q96GG9 259 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 SGSM3Q96HU1 749 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 COPS8Q99627 209 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 WDR83Q9BRX9 315 aaKnown RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 BOCQ9BWV1 1114 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CLPBQ9H078 707 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 RMI1Q9H9A7 625 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 FAM114A2Q9NRY5 505 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CATSPERZQ9NTU4 200 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ZDHHC3Q9NYG2 299 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 IL1RAPL1Q9NZN1 696 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 VPS18Q9P253 973 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 MARCH4Q9P2E8 410 aaPredicted RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 ZC3H7BQ9UGR2 993 aaKnown RBP9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CHMP2BQ9UQN3 213 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 PLEKHM1Q9Y4G2 1056 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 PCDHGB2Q9Y5G2 931 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 TEX264Q9Y6I9 313 aa9.16□□□□□ -0.94
PDGFC-202ENST00000422544 CFAP46Q8IYW2 2715 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 NEMP2A6NFY4 417 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 E7ESA3 106 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 TRIM38O00635 465 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 SLC30A4O14863 429 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 CHUKO15111 745 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 YY2O15391 372 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 AQP9O43315 295 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 SH3BP5O60239 455 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 OR1I1O60431 355 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms