RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 HOXD12P35452 270 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 MPLP40238 635 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 CTSCP53634 463 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 EIF3BP55884 814 aaKnown RBP15.52■□□□□ 0.07
DDX55-203ENST00000421670 C21orf59P57076 290 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 NXPH1P58417 271 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 OVGP1Q12889 678 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 FZD2Q14332 565 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 ITIH4Q14624 930 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 TEAD4Q15561 434 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 RNF187Q5TA31 235 aaPredicted RBP15.52■□□□□ 0.07
DDX55-203ENST00000421670 LAIR1Q6GTX8 287 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 ZNF449Q6P9G9 518 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 CNSTQ6PJW8 725 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 PACS1Q6VY07 963 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 STRA8Q7Z7C7 330 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 MREGQ8N565 214 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 GABPB2Q8TAK5 448 aaPredicted RBP15.52■□□□□ 0.07
DDX55-203ENST00000421670 OR1E3Q8WZA6 343 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 TSACCQ96A04 125 aaPredicted RBP15.52■□□□□ 0.07
DDX55-203ENST00000421670 SGF29Q96ES7 293 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 DCUN1D1Q96GG9 259 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 LOXL4Q96JB6 756 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 TCF12Q99081 682 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 CYTH2Q99418 400 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 TTC1Q99614 292 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 VPS18Q9P253 973 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 KLQ9UEF7 1012 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 SUFUQ9UMX1 484 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 SLC17A4Q9Y2C5 497 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 ANKRD6Q9Y2G4 727 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 PRKAB1Q9Y478 270 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 PRSS21Q9Y6M0 314 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 ZNF292O60281 2723 aa15.52■□□□□ 0.07
DDX55-203ENST00000421670 EXOC1LA0A1B0GW35 172 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 PRSS38A1L453 326 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 CFAP99D6REC4 459 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 VEGFDO43915 354 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 FAM155BO75949 473 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 AHSGP02765 367 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 RALBP11234 206 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 ATP1B2P14415 290 aaPredicted RBP15.51■□□□□ 0.07
DDX55-203ENST00000421670 PPARGP37231 505 aaPredicted RBP15.51■□□□□ 0.07
DDX55-203ENST00000421670 NSG1P42857 185 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 LEPRP48357 1165 aaKnown RBP15.51■□□□□ 0.07
DDX55-203ENST00000421670 BNC1Q01954 994 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 PTK2BQ14289 1009 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 ALG11Q2TAA5 492 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 ZNF542PQ5EBM4 170 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 CRTC3Q6UUV7 619 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 KIAA0408Q6ZU52 694 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 RD3Q7Z3Z2 195 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 PARGQ86W56 976 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 TRAPPC5Q8IUR0 188 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 BEND7Q8N7W2 519 aaPredicted RBP15.51■□□□□ 0.07
DDX55-203ENST00000421670 CLPBQ9H078 707 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 KCNH6Q9H252 994 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 CYP4F12Q9HCS2 524 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 KLF15Q9UIH9 416 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 HCN4Q9Y3Q4 1203 aa15.51■□□□□ 0.07
DDX55-203ENST00000421670 PRMT5O14744 637 aaPredicted RBP15.5■□□□□ 0.07
DDX55-203ENST00000421670 PFDN6O15212 129 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 SGTAO43765 313 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 NUAK1O60285 661 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 DNAJC6O75061 913 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 ZNF7P17097 686 aaPredicted RBP15.5■□□□□ 0.07
DDX55-203ENST00000421670 NBL1P41271 181 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 DPP6P42658 865 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 GNPDA1P46926 289 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 EIF2B5Q13144 721 aaKnown RBP15.5■□□□□ 0.07
DDX55-203ENST00000421670 GTF2H3Q13889 308 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 TCEA2Q15560 299 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 DUOXA1Q1HG43 343 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 KIF19Q2TAC6 998 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 PLA2G4EQ3MJ16 856 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 TRIM61Q5EBN2 209 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 BEND6Q5SZJ8 279 aaPredicted RBP15.5■□□□□ 0.07
DDX55-203ENST00000421670 FBXO38Q6PIJ6 1188 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 SLC26A11Q86WA9 606 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 LRRC6Q86X45 466 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 DCP2Q8IU60 420 aaKnown RBP15.5■□□□□ 0.07
DDX55-203ENST00000421670 HID1Q8IV36 788 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 PAFAH2Q99487 392 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 IRF2BPLQ9H1B7 796 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 P2RY12Q9H244 342 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 CARS2Q9HA77 564 aaKnown RBP15.5■□□□□ 0.07
DDX55-203ENST00000421670 NSMCE4AQ9NXX6 385 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 TXNDC16Q9P2K2 825 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 SNX11Q9Y5W9 270 aa15.5■□□□□ 0.07
DDX55-203ENST00000421670 POC1B-GALNT4F8VUJ3 575 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 MAGEC1O60732 1142 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 H2AFXP16104 143 aaPredicted RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 FMO4P31512 558 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 CD151P48509 253 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 SRP54P61011 504 aaKnown RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 GRIK2Q13002 908 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 NAB1Q13506 487 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 KLHL38Q2WGJ6 581 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 CTSL3PQ5NE16 218 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 PRAMEF14Q5SWL7 426 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms