RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SLC6A2P23975 617 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 GJA8P48165 433 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 MLLT6P55198 1093 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 HSPA14Q0VDF9 509 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 DNASE1L3Q13609 305 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 RAB39AQ14964 217 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 PYCR3Q53H96 274 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 EGFLAMQ63HQ2 1017 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 NCCRP1Q6ZVX7 275 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 SLC22A9Q8IVM8 553 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 PGBD5Q8N414 524 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 DDHD1Q8NEL9 900 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 NCSTNQ92542 709 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 BIRC7Q96CA5 298 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 CDKN2AIPNLQ96HQ2 116 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 TPD52L3Q96J77 140 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 RTP3Q9BQQ7 232 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 NSUN3Q9H649 340 aaKnown RBP13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 WWOXQ9NZC7 414 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 ZNF229Q9UJW7 825 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 ZNF451Q9Y4E5 1061 aa13.09□□□□□ -0.31
TNFRSF8-203ENST00000417814 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.31
TNFRSF8-203ENST00000417814 AP3B1O00203 1094 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 F2P00734 622 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 CST1P01037 141 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 CYBBP04839 570 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZXDBP98169 803 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 FAM174BQ3ZCQ3 159 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 MS4A13Q5J8X5 152 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 TMCO2Q7Z6W1 182 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 SYVN1Q86TM6 617 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 ITIH5Q86UX2 942 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 TRIM15Q9C019 465 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 POLR1EQ9GZS1 481 aaKnown RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 SLC25A51Q9H1U9 297 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 DUS2Q9NX74 493 aaKnown RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 IFT80Q9P2H3 777 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 BCL10O95999 233 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 PRDX6P30041 224 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 HSPA13P48723 471 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 POLR2JP52435 117 aaKnown RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 HERVK_113P63132 956 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 ACAP2Q15057 778 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 ANKRD26P1Q6NSI1 321 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 ENPP6Q6UWR7 440 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 LINC01465Q8N7H1 131 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 FRS2Q8WU20 508 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 NTAN1Q96AB6 310 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 ERVK-6Q9BXR3 956 aa13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 KIAA0100Q14667 2235 aaKnown RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 URB1O60287 2271 aaKnown RBP13.08□□□□□ -0.32
TNFRSF8-203ENST00000417814 TMEM247A6NEH6 219 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 K7ERQ8 282 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 MITFO75030 526 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 S100BP04271 92 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 HSPA1AP0DMV8 641 aaKnown RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 HSPA1BP0DMV9 641 aaKnown RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 DAB2P98082 770 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 KIAA0930Q6ICG6 404 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 NANOGP8Q6NSW7 305 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 CACUL1Q86Y37 369 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 RAVER1Q8IY67 606 aaKnown RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 STAG3L4Q8TBR4 150 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 TMBIM1Q969X1 311 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 ABHD8Q96I13 439 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 EBPLQ9BY08 206 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 TNKS2Q9H2K2 1166 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 NANOGQ9H9S0 305 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 CD84Q9UIB8 345 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 SNX5Q9Y5X3 404 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 KCNE1P15382 129 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 PWP1Q13610 501 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 PAGE2BQ5JRK9 111 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 SZRD1Q7Z422 152 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 EPHX4Q8IUS5 362 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 C2orf69Q8N8R5 385 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 ADGRE2Q9UHX3 823 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 DAPK2Q9UIK4 370 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZFP37Q9Y6Q3 630 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 F5H5T6 163 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 PSMD3O43242 534 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 SH3BP5O60239 455 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 NPHS1O60500 1241 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 TOMM70O94826 608 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 CCL23P55773 120 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 BOP1Q14137 746 aaKnown RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 UPP1Q16831 310 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 TRIM16LQ309B1 348 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
TNFRSF8-203ENST00000417814 CNIH3Q8TBE1 160 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms