RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 H2AFVQ71UI9 128 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 ZNF765Q7L2R6 523 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 NT5DC3Q86UY8 548 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 DTX1Q86Y01 620 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 PLXDC1Q8IUK5 500 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 CBARPQ8N350 705 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 SFRP1Q8N474 314 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 TMEM151AQ8N4L1 468 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 SLC25A41Q8N5S1 370 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 NIPA2Q8N8Q9 360 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 ARRDC2Q8TBH0 407 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 HTR3CQ8WXA8 447 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 RAPGEF5Q92565 580 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 SYN2Q92777 582 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 CXorf40BQ96DE9 158 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 TEFMQ96QE5 360 aaKnown RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 HERPUD2Q9BSE4 406 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 DDA1Q9BW61 102 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 PACSIN1Q9BY11 444 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 APMAPQ9HDC9 416 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 STARD5Q9NSY2 213 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 UBP1Q9NZI7 540 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 CPNE7Q9UBL6 633 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 FAM8A1Q9UBU6 413 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 CAPN11Q9UMQ6 739 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.89□□□□□ -1.31
COPS3-202ENST00000417352 KIR2DS5A0A0G2JLQ3 304 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 A0A0G2JNG1 304 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 LOC101059948A0A1B0GTJ6 334 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 B4E171 279 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 KIR2DS3K7RE56 304 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 SUV39H1O43463 412 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 NUAK1O60285 661 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 FZD6O60353 706 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 STK17BO94768 372 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 UBXN7O94888 489 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PROSCO94903 275 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 CDK14O94921 469 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PRLP01236 227 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 VCLP18206 1134 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 TCN2P20062 427 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 IDSP22304 550 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 KDELR1P24390 212 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 TEAD1P28347 426 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PBLDP30039 288 aaPredicted RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 DLSTP36957 453 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 TSPAN7P41732 249 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 FASLGP48023 281 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 RPL26P61254 145 aaKnown RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 MC2RQ01718 297 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 ZBTB17Q13105 803 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 ERV3-1Q14264 604 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 IHHQ14623 411 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 KIR2DS5Q14953 304 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 NR1D2Q14995 579 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 IQCB1Q15051 598 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 FIGNQ5HY92 759 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 NPNTQ6UXI9 565 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 C17orf82Q86X59 251 aaPredicted RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 TRAPPC5Q8IUR0 188 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PQLC3Q8N755 202 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 GPR26Q8NDV2 337 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 SPATA22Q8NHS9 363 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 C9orf43Q8TAL5 461 aaPredicted RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 SLC35G2Q8TBE7 412 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 NANOS1Q8WY41 292 aaKnown RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 MAML1Q92585 1016 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 RTP4Q96DX8 246 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 STAMBPL1Q96FJ0 436 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 SCARF2Q96GP6 870 aaPredicted RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 COX14Q96I36 57 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 TSGA13Q96PP4 275 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 RNF157Q96PX1 679 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 OR6C1Q96RD1 312 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 ZNF670Q9BS34 389 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 ZSCAN5AQ9BUG6 496 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 EFHD1Q9BUP0 239 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 SLC12A9Q9BXP2 914 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 BRD8Q9H0E9 1235 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 RMI1Q9H9A7 625 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 TRIM39Q9HCM9 518 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 SARS2Q9NP81 518 aaKnown RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 GEMIN8Q9NWZ8 242 aaKnown RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 DTLQ9NZJ0 730 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 VPS18Q9P253 973 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 UVRAGQ9P2Y5 699 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 AMACRQ9UHK6 382 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 LNPEPQ9UIQ6 1025 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PILRAQ9UKJ1 303 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 CNOT6Q9ULM6 557 aaKnown RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 PSMD13Q9UNM6 376 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 RPL26L1Q9UNX3 145 aaKnown RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 PPIL1Q9Y3C6 166 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 HYOU1Q9Y4L1 999 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PCDHGA3Q9Y5H0 932 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PCYT1BQ9Y5K3 369 aaPredicted RBP6.88□□□□□ -1.31
COPS3-202ENST00000417352 AHCTF1Q8WYP5 2266 aa6.88□□□□□ -1.31
COPS3-202ENST00000417352 PIPSLA2A3N6 862 aa6.87□□□□□ -1.31
COPS3-202ENST00000417352 CDC14CA4D256 554 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms