RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 C15orf39Q6ZRI6 1047 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 FAM35AQ86V20 835 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 CLEC10AQ8IUN9 316 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 TMEM199Q8N511 208 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 OR9I1Q8NGQ6 314 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 SETD6Q8TBK2 473 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 TMCO6Q96DC7 493 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 MYO19Q96H55 970 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 ZNF578Q96N58 590 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-202ENST00000417344 RDH12Q96NR8 316 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 NEDD4LQ96PU5 975 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 RBBP8Q99708 897 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 APOL4Q9BPW4 351 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 CCDC32Q9BV29 185 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 ZBTB20Q9HC78 741 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-202ENST00000417344 MRPL39Q9NYK5 338 aaKnown RBP6.34□□□□□ -1.39
CCNT1-202ENST00000417344 STOML2Q9UJZ1 356 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 TBC1D24Q9ULP9 559 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 STAP1Q9ULZ2 295 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 KCNH4Q9UQ05 1017 aa6.34□□□□□ -1.39
CCNT1-202ENST00000417344 COL4A1P02462 1669 aa6.34□□□□□ -1.4
CCNT1-202ENST00000417344 IGLV3-22A0A075B6J6 115 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PNMA8CA0A1B0GUJ8 204 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 BCLAF3A2AJT9 711 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 LINC00862A6NCI5 91 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CLDN24A6NM45 220 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 LOC110117498-PIK3R3F6TDL0 507 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 I3L521 148 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 NFIBO00712 420 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 LCE2BO14633 110 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ANGPT2O15123 496 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 SLC16A4O15374 487 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 LRIG2O94898 1065 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 NDUFB10O96000 172 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 HLA-DRAP01903 254 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 C2P06681 752 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ERVK-10P10266 1014 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ACADMP11310 421 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CYP19A1P11511 503 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MTHFD1P11586 935 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF30P17039 623 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 POU3F3P20264 500 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MSH3P20585 1137 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CD6P30203 668 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MIPP30301 263 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CSTF2P33240 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 EVI2BP34910 448 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 SPRP35270 261 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MAP2K4P45985 399 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CLK1P49759 484 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 LIMK2P53671 638 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CRADDP78560 199 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CD83Q01151 205 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 SEMA3BQ13214 749 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TNK1Q13470 666 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 FRG1Q14331 258 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 GALEQ14376 348 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF267Q14586 743 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PIK3R6Q5UE93 754 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 FSTL4Q6MZW2 842 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 EFL1Q7Z2Z2 1120 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PODNQ7Z5L7 613 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 RBM23Q86U06 439 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TCTE3Q8IZS6 198 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MINDY1Q8N5J2 469 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 AMER2Q8N7J2 671 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 C7orf57Q8NEG2 295 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 OR7D4Q8NG98 312 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 JOSD2Q8TAC2 188 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MCOLN3Q8TDD5 553 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 KCTD4Q8WVF5 259 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ELMO1Q92556 727 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF566Q969W8 418 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MSANTD3Q96H12 275 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 RPL10LQ96L21 214 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MBOAT4Q96T53 435 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MXRA8Q9BRK3 442 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 FEM1AQ9BSK4 669 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 NXF2Q9GZY0 626 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MUC13Q9H3R2 512 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TASP1Q9H6P5 420 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CAB39LQ9H9S4 337 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 IL1RL2Q9HB29 575 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 APOBEC3GQ9HC16 384 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 LTB4R2Q9NPC1 389 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CMTM6Q9NX76 183 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CCDC59Q9P031 241 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ARHGAP28Q9P2N2 729 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 NUFIP1Q9UHK0 495 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 RAPGEFL1Q9UHV5 662 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 GMEB2Q9UKD1 530 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CNTN6Q9UQ52 1028 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 DDX60LQ5H9U9 1706 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 IGKV6D-41A0A0C4DH26 115 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ATP6AP2A0A1C7CYW4 349 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF487B1APH4 448 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 XPNPEP2O43895 674 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 UGT2B17O75795 530 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TRUB2O95900 331 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms