RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SKIV2L2P42285 1042 aaKnown RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 CDKN2DP55273 166 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 TAS2R39P59534 338 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 KIAA1024LP59773 190 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 YPEL5P62699 121 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 SLC18A2Q05940 514 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 USP10Q14694 798 aaKnown RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 ZNF528Q3MIS6 628 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 TTMPQ5BVD1 217 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 RBM20Q5T481 1227 aaKnown RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 ABI3BPQ7Z7G0 1075 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 EXOC3L1Q86VI1 746 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 CLDN19Q8N6F1 224 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 GPATCH11Q8N954 259 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 RASGEF1AQ8N9B8 481 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 GDAP1Q8TB36 358 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 FUBP1Q96AE4 644 aaKnown RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 CCDC97Q96F63 343 aaPredicted RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 ATXN7L3BQ96GX2 97 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 ELMO2Q96JJ3 720 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 SERAC1Q96JX3 654 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 ZNF514Q96K75 400 aaPredicted RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 NDNQ99608 321 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 APOOQ9BUR5 198 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 CCDC68Q9H2F9 335 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 CENPHQ9H3R5 247 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 FAM53CQ9NYF3 392 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 SLC39A10Q9ULF5 831 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 INVSQ9Y283 1065 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 OAS3Q9Y6K5 1087 aaKnown RBP14.08□□□□□ -0.16
SF3B1-204ENST00000414963 PRSS21Q9Y6M0 314 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 A0A0C4DFX4 3053 aa14.08□□□□□ -0.16
SF3B1-204ENST00000414963 PLXND1Q9Y4D7 1925 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 A0A1W2PPM1 405 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 POM121BA6NF01 834 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 TPP1O14773 563 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 CHUKO15111 745 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 MAP3K13O43283 966 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 WISP3O95389 354 aaPredicted RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 MPOP05164 745 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 OR56A5P0C7T3 313 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 STMN1P16949 149 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 BCKDHBP21953 392 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 TYK2P29597 1187 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 AKT1P31749 480 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 SLC26A3P40879 764 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 CCNFP41002 786 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 NUBP1P53384 320 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 RAB10P61026 200 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 RPL6Q02878 288 aaKnown RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 BCL7AQ4VC05 210 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 HSP90B2PQ58FF3 399 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 PTRHD1Q6GMV3 140 aaKnown RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 KYAT3Q6YP21 454 aaKnown RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 GCNT7Q6ZNI0 430 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 SLC41A1Q8IVJ1 513 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 CEP97Q8IW35 865 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 GAB3Q8WWW8 586 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 DNASE2BQ8WZ79 361 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 ALKBH8Q96BT7 664 aaKnown RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 ZBTB9Q96C00 473 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 SCARF2Q96GP6 870 aaPredicted RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 CABS1Q96KC9 395 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 OLFM1Q99784 485 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 LGR4Q9BXB1 951 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 SSU72Q9NP77 194 aaKnown RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 FZD3Q9NPG1 666 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 SNX15Q9NRS6 342 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 TAS2R13Q9NYV9 303 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 ATXN10Q9UBB4 475 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 NOVA2Q9UNW9 492 aaKnown RBP14.07□□□□□ -0.16
SF3B1-204ENST00000414963 GPR34Q9UPC5 381 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 SLC17A4Q9Y2C5 497 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 OR1A2Q9Y585 309 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 CACNA1IQ9P0X4 2223 aa14.07□□□□□ -0.16
SF3B1-204ENST00000414963 PLXNB3Q9ULL4 1909 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 FOXO6A8MYZ6 492 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 CACNB4O00305 520 aaPredicted RBP14.06□□□□□ -0.16
SF3B1-204ENST00000414963 MTX2O75431 263 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 VPS26AO75436 327 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 CDK14O94921 469 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 GSTM1P09488 218 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 KRT4P19013 534 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 CNR2P34972 360 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 RABIFP47224 123 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 PRLHRP49683 370 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 CLCN7P51798 805 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 SLC12A2P55011 1212 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 CLDN2P57739 230 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 GSTM4Q03013 218 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 ZNF648Q5T619 568 aaPredicted RBP14.06□□□□□ -0.16
SF3B1-204ENST00000414963 UGT3A1Q6NUS8 523 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 TRIM74Q86UV6 250 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 LCA5Q86VQ0 697 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 C1orf216Q8TAB5 229 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 SGF29Q96ES7 293 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 LINC00615Q96LM1 132 aaPredicted RBP14.06□□□□□ -0.16
SF3B1-204ENST00000414963 PANX3Q96QZ0 392 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 OR2AG1Q9H205 316 aa14.06□□□□□ -0.16
SF3B1-204ENST00000414963 RMI1Q9H9A7 625 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms