RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TNK2Q07912 1038 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 ITGA7Q13683 1181 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 LYPLAL1Q5VWZ2 237 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 RGMBQ6NW40 437 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PPM1MQ96MI6 270 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PLEKHA6Q9Y2H5 1048 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 RIIAD1A6NNX1 92 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 SLITRK3O94933 977 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 RNF43Q68DV7 783 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 GK5Q6ZS86 529 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 TTTY10Q9BZA0 68 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 EML1O00423 815 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 TRMT5Q32P41 509 aaKnown RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 CNPY4Q8N129 248 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 TMEM156Q8N614 296 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 OR4K2Q8NGD2 314 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 LEF1Q9UJU2 399 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 LGR5O75473 907 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 FAUP35544 74 aaKnown RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 MAPK12P53778 367 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 SMIM11AP58511 58 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 TMC8Q8IU68 726 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 HPS1Q92902 700 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 KLRF1Q9NZS2 232 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ARHGEF40Q8TER5 1519 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 YDJCA8MPS7 323 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 VNN2O95498 520 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ENTPD1P49961 510 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 RAB10P61026 200 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 CD47Q08722 323 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 DSG2Q14126 1118 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 SIM2Q14190 667 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ARSHQ5FYA8 562 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 POLMQ9NP87 494 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 HBS1LQ9Y450 684 aaKnown RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 MYOCOSA0A1B0GUC4 107 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ANXA2P2A6NMY6 339 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 NOL4O94818 638 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ANXA2P07355 339 aaKnown RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 GLUD2P49448 558 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 SCGB2B2Q4G0G5 96 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ADGRA1Q86SQ6 560 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 GPC2Q8N158 579 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ZNF567Q8N184 647 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 CYB5D2Q8WUJ1 264 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 B3GNT5Q9BYG0 378 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 DDX20Q9UHI6 824 aaKnown RBP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
SHANK3-202ENST00000414786 HACD1B0YJ81 288 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 LDB2O43679 373 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 COL6A1P12109 1028 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 PBX3P40426 434 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 MTHFRP42898 656 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 ECHDC2Q86YB7 292 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 OR5T2Q8NGG2 359 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 CERS2Q96G23 380 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 CORO2BQ9UQ03 480 aa18.34■□□□□ 0.53
SHANK3-202ENST00000414786 TEX46H3BTG2 121 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 TUBG1P23258 451 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 TMEM151BQ8IW70 566 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 EIF1ADQ8N9N8 165 aaKnown RBP18.33■□□□□ 0.53
SHANK3-202ENST00000414786 THAP3Q8WTV1 239 aaPredicted RBP18.33■□□□□ 0.53
SHANK3-202ENST00000414786 ASB2Q96Q27 587 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 METTL8Q9H825 291 aaKnown RBP18.33■□□□□ 0.53
SHANK3-202ENST00000414786 ENY2Q9NPA8 101 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 POLR3BQ9NW08 1133 aaPredicted RBP18.33■□□□□ 0.53
SHANK3-202ENST00000414786 ZDHHC9Q9Y397 364 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 MAP3K4Q9Y6R4 1608 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 SYN2Q92777 582 aaPredicted RBP18.33■□□□□ 0.53
SHANK3-202ENST00000414786 CLCA3PQ9Y6N3 262 aa18.33■□□□□ 0.53
SHANK3-202ENST00000414786 CLPXO76031 633 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 ETS2P15036 469 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 COX18Q8N8Q8 333 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 ZNF398Q8TD17 642 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 CNTNAP1P78357 1384 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 ARFRP1Q13795 201 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 LMX1AQ8TE12 382 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 FCRL2Q96LA5 508 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-202ENST00000414786 RTFDC1Q9BY42 306 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-202ENST00000414786 PCDHGB5Q9Y5G0 923 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 CXCL11O14625 94 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 BMT2Q1RMZ1 405 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 ANXA8L1Q5VT79 327 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 DEPDC4Q8N2C3 294 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 FNIP1Q8TF40 1166 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 RCN3Q96D15 328 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 FKBP7Q9Y680 259 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 hCG_2039718K7EN88 272 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 PDPK1O15530 556 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 GRK6P43250 576 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 S100A10P60903 97 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 DCTN2Q13561 401 aaKnown RBP18.33■□□□□ 0.52
SHANK3-202ENST00000414786 TMEM220Q6QAJ8 160 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 RBFAQ8N0V3 343 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 DNAJA4Q8WW22 397 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-202ENST00000414786 MCCC1Q96RQ3 725 aaPredicted RBP18.33■□□□□ 0.52
SHANK3-202ENST00000414786 PRDM8Q9NQV8 689 aa18.33■□□□□ 0.52
SHANK3-202ENST00000414786 SSX5O60225 188 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 LPAL2Q16609 132 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 PRSS55Q6UWB4 352 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms