RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 DMTF1Q9Y222 760 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 HS3ST2Q9Y278 367 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 NCKAP1Q9Y2A7 1128 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 REXO2Q9Y3B8 237 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 PCDHA13Q9Y5I0 950 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 CEP250Q9BV73 2442 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 BPTFQ12830 3046 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 MYLKQ15746 1914 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3DA0A087WVF3 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3IA0A087WXS9 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3EA0A087X179 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3KA0A087X1G2 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 A0A0A6YYJ9 748 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 LNP1A1A4G5 178 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 CCDC189A1A4V9 331 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 LRRD1A4D1F6 860 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3FA6NER0 549 aaPredicted RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 ARHGAP42A6NI28 874 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ZNF839A8K0R7 811 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3LB9A6J9 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 C1QTNF3-AMACRE9PGA6 284 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 MCF2LO15068 1137 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 SPOPO43791 374 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 OPHN1O60890 802 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 NDUFA10O95299 355 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PIGNO95427 931 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 KRT1P04264 644 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PRKCGP05129 697 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 UGT2B4P06133 528 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 IGHV4-34P06331 123 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3HP0C7X1 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ZNF806P0C7X5 589 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 COMTP21964 271 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 IL4RP24394 825 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 APEX1P27695 318 aaKnown RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 OXTRP30559 389 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 CYLC1P35663 651 aaPredicted RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 RGRP47804 291 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 MARCKSL1P49006 195 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ARSEP51690 589 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ADPRHP54922 357 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 NAP1L1P55209 391 aaKnown RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 RHOAP61586 193 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 DYNLT1P63172 113 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 IRX4P78413 519 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 IL10RAQ13651 578 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ACAP1Q15027 740 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 CYTH1Q15438 398 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 SPA17Q15506 151 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 DPYSL2Q16555 572 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 HADHQ16836 314 aaKnown RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 PARP15Q460N3 678 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 BOLA3Q53S33 107 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ANKRD20A8PQ5CZ79 823 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 CARD16Q5EG05 197 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 XP32Q5T750 250 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 RNF220Q5VTB9 566 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 AGBL4Q5VU57 503 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3GQ6DHY5 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3CQ6IPX1 549 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ERAP2Q6P179 960 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 NCEH1Q6PIU2 408 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TMCO3Q6UWJ1 677 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 RPTNQ6XPR3 784 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 LIPIQ6XZB0 460 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 B4GALNT4Q76KP1 1039 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PARS2Q7L3T8 475 aaKnown RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 PROSER1Q86XN7 944 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 DTX1Q86Y01 620 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 SYT12Q8IV01 421 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TMEM139Q8IV31 216 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D3Q8IZP1 549 aaPredicted RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 UMODL1-AS1Q8N2C9 162 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS41-205ENST00000414632 CDYL2Q8N8U2 506 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 WDR48Q8TAF3 677 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 TEKT4Q8WW24 435 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 RFFLQ8WZ73 363 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 RAPGEF5Q92565 580 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 HDAC10Q969S8 669 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 BIRC7Q96CA5 298 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 RMDN1Q96DB5 314 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 LOXL4Q96JB6 756 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 CCDC114Q96M63 670 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 KLHL32Q96NJ5 620 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PANX2Q96RD6 677 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 BAG1Q99933 345 aaPredicted RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 ADI1Q9BV57 179 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 EDEM2Q9BV94 578 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PITHD1Q9GZP4 211 aaPredicted RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 RNF32Q9H0A6 362 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 EBF2Q9HAK2 575 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PDFQ9HBH1 243 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 FZD3Q9NPG1 666 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 DMRT3Q9NQL9 472 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 VPS45Q9NRW7 570 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 MBNL3Q9NUK0 354 aaKnown RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 TMEM51Q9NW97 253 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 LHX3Q9UBR4 397 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 UBA2Q9UBT2 640 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms