RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 EDEM2Q9BV94 578 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 YTHDF1Q9BYJ9 559 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 PRKD2Q9BZL6 878 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 C2orf40Q9H1Z8 148 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SETD4Q9NVD3 440 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ABCD2Q9UBJ2 740 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TRHDEQ9UKU6 1024 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 PSME2Q9UL46 239 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 DENND2AQ9ULE3 1009 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 NHSL1Q5SYE7 1610 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 A8MV72 311 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 ARNTLO00327 626 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 ENTPD3O75355 529 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 TADA2AO75478 443 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 SORBS2O94875 1100 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 GOSR1O95249 250 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 CPNE6O95741 557 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PTTG1O95997 202 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 MBP02144 154 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 RBP1P09455 135 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 CYP2D6P10635 497 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 NR2C1P13056 603 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 TNNI3P19429 210 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 OGNP20774 298 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 XPAP23025 273 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 PGDP52209 483 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 SNAP25P60880 206 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 ARHGAP8P85298 464 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 TNK1Q13470 666 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 ETFDHQ16134 617 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 HSF5Q4G112 596 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 SGO1Q5FBB7 561 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 EFHC2Q5JST6 749 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 ACER2Q5QJU3 275 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 RABGAP1LQ5R372 815 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 WDR73Q6P4I2 378 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PAPD4Q6PIY7 484 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 USP45Q70EL2 814 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PDZD4Q76G19 769 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 SLC16A13Q7RTY0 426 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PIWIL3Q7Z3Z3 882 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 DPPA2Q7Z7J5 298 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 CCDC60Q8IWA6 550 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 ZCCHC9Q8N567 271 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 PCDH20Q8N6Y1 951 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 DEDD2Q8WXF8 326 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 APBB2Q92870 758 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 TUBGCP3Q96CW5 907 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PWWP2AQ96N64 755 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 CASD1Q96PB1 797 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PTDSS2Q9BVG9 487 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 OR51B6Q9H340 312 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 RNPEPQ9H4A4 650 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 C11orf49Q9H6J7 331 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 NUDT15Q9NV35 164 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 DNAJC11Q9NVH1 559 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 DIP2BQ9P265 1576 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 MEX3AA1L020 520 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 C7orf72A4D263 438 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 LYPLA1O75608 230 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 H2AFB1P0C5Y9 115 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 MUC1P15941 1255 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 FGFR2P21802 821 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 GRK3P35626 688 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 EIF2DP41214 584 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 LIG4P49917 911 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 RGS1Q08116 209 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 C17orf67Q0P5P2 114 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 MMRN1Q13201 1228 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 ARHGAP19Q14CB8 494 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 DPYSL2Q16555 572 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 CALCRLQ16602 461 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 DUSP6Q16828 381 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 FNDC3BQ53EP0 1204 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 PAN3Q58A45 887 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 NPSR1Q6W5P4 371 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 USP53Q70EK8 1073 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 LRP10Q7Z4F1 713 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 HEATR3Q7Z4Q2 680 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PLCZ1Q86YW0 608 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 TMC8Q8IU68 726 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 FAM217AQ8IXS0 508 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 SEPT12Q8IYM1 358 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 UBL4BQ8N7F7 174 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 ZNF511Q8NB15 262 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 AGBL3Q8NEM8 1001 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 KCTD13Q8WZ19 329 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 USP7Q93009 1102 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 WBP1Q96G27 269 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 FRMD6Q96NE9 622 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 UHRF1Q96T88 793 aaPredicted RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 BARD1Q99728 777 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 DPYSL5Q9BPU6 564 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PELOQ9BRX2 385 aaKnown RBP5.19□□□□□ -1.58
HERC4-205ENST00000412272 TSSK1BQ9BXA7 367 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 TEKT3Q9BXF9 490 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 PIGUQ9H490 435 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 KANSL2Q9H9L4 492 aa5.19□□□□□ -1.58
HERC4-205ENST00000412272 CAB39LQ9H9S4 337 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms