RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 KCNK1O00180 336 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 SLC4A1P02730 911 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 MT-ND3P03897 115 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PIRTP0C851 137 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CASP14P31944 242 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CAPZBP47756 277 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PMS2P54278 862 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 DNASE1L3Q13609 305 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PDK2Q15119 407 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 NFKBIBQ15653 356 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ANO6Q4KMQ2 910 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 FAM182AQ5T1J6 154 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 IRGCQ6NXR0 463 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ABRAXAS1Q6UWZ7 409 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 FAM92BQ6ZTR7 304 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PRSS42Q7Z5A4 293 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PPP1R3BQ86XI6 285 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CPNE8Q86YQ8 564 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 MAP7D3Q8IWC1 876 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TRAM1L1Q8N609 369 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PQLC3Q8N755 202 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CNTD1Q8N815 330 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 KLHL6Q8WZ60 621 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ZDHHC12Q96GR4 267 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TIMM29Q9BSF4 260 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 LHX9Q9NQ69 397 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 RAD18Q9NS91 495 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 POT1Q9NUX5 634 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TRIM10Q9UDY6 481 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PCDHGA6Q9Y5G7 932 aa14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 BZW2Q9Y6E2 419 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB2-229ENST00000411527 USP9YO00507 2555 aaPredicted RBP14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 A0A1B0GTH6 734 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 GOLGA6L3A6NEY3 463 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 OR52A4PA6NMU1 304 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TTLL8A6PVC2 850 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 SMTNL1A8MU46 457 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 VPS4BO75351 444 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 MTX2O75431 263 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 DNAJB5O75953 348 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CDK14O94921 469 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 RECKO95980 971 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PDGFAP04085 211 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 BRAFP15056 766 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 NELFEP18615 380 aaKnown RBP14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 IDSP22304 550 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 DRG2P55039 364 aaKnown RBP14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 DCDC1P59894 354 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 GPR18Q14330 331 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PDPK2PQ6A1A2 396 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TMC3Q7Z5M5 1100 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ZNF547Q8IVP9 402 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CT55Q8WUE5 264 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 HDAC11Q96DB2 347 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CXorf40BQ96DE9 158 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TRIB3Q96RU7 358 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 GPR63Q9BZJ6 419 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 MAGEE1Q9HCI5 957 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 PDE7BQ9NP56 450 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 EPHA6Q9UF33 1036 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 VPS4AQ9UN37 437 aa14□□□□□ -0.17
HLA-DQB2-229ENST00000411527 A0A087X0T9 212 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 VEGFDO43915 354 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 AGFG2O95081 481 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TIAF1O95411 115 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 FAM228BP0C875 321 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 UQCRFS1P47985 274 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TAS2R40P59535 323 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ZBTB17Q13105 803 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 SEMA5AQ13591 1074 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 NR1I3Q14994 352 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 KHDC1Q4VXA5 237 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 FIGNQ5HY92 759 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 AGAP9Q5VTM2 703 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 HIST2H2BCQ6DN03 193 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CYB5D1Q6P9G0 228 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 FAM199XQ6PEV8 388 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 WASH2PQ6VEQ5 465 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 APLFQ8IW19 511 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 RBM12BQ8IXT5 1001 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 SIDT2Q8NBJ9 832 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 FAF2Q96CS3 445 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ZNF830Q96NB3 372 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 GBP4Q96PP9 640 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 BPIFA3Q9BQP9 254 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 TRIM55Q9BYV6 548 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 CEP41Q9BYV8 373 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 RAB33BQ9H082 229 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 BRD8Q9H0E9 1235 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ACTL8Q9H568 366 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 AKIRIN1Q9H9L7 192 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 WASH6PQ9NQA3 447 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 NFKBIL1Q9UBC1 381 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 RARRES3Q9UL19 164 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 ZNF711Q9Y462 761 aa13.99□□□□□ -0.17
HLA-DQB2-229ENST00000411527 IGHV5-51A0A0C4DH38 117 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms