RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 TM7SF2O76062 418 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 NUDT17P0C025 328 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 KDELR1P24390 212 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 RPL14P50914 215 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 SCN1BQ07699 218 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 SLC25A25Q6KCM7 469 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ADAMTSL2Q86TH1 951 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 CIR1Q86X95 450 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 COX18Q8N8Q8 333 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 NDRG1Q92597 394 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 BTBD10Q9BSF8 475 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 C8orf4Q9NR00 106 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 CRNNQ9UBG3 495 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 AP3M1Q9Y2T2 418 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 SMCO3A2RU48 225 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ZSCAN5DPP0CG00 497 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 TNK2Q07912 1038 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 TAS1R3Q7RTX0 852 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ARL10Q8N8L6 244 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ARHGAP20Q9P2F6 1191 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 APOC1P02654 83 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 OAZ1P54368 228 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 PRR5P85299 388 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 THOC7Q6I9Y2 204 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 CYB5D1Q6P9G0 228 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 OR6K6Q8NGW6 343 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 OR2L8Q8NGY9 312 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ING4Q9UNL4 249 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 GLYATL1P3A0A0U1RQE8 302 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ENPEPQ07075 957 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ELP6Q0PNE2 266 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 C1orf94Q6P1W5 598 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 TMPRSS11AQ6ZMR5 421 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ACTRT1Q8TDG2 376 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ZNF285Q96NJ3 590 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 COPS8Q99627 209 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 PORCNQ9H237 461 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 NXF3Q9H4D5 531 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 C12orf4Q9NQ89 552 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 TMLHEQ9NVH6 421 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 ADGRE2Q9UHX3 823 aa11.15□□□□□ -0.62
PRPF40A-202ENST00000410080 EIF1AYO14602 144 aaKnown RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 TBX1O43435 398 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 OR1I1O60431 355 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 UBOX5O94941 541 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 GRK6P43250 576 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 RGS8P57771 180 aaPredicted RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 TSPAN5P62079 268 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 ILF3Q12906 894 aaKnown RBP eCLIP11.15□□□□□ -0.631e-7■■■■□ 24
PRPF40A-202ENST00000410080 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 PITRM1Q5JRX3 1037 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 KYAT3Q6YP21 454 aaKnown RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 ACP6Q9NPH0 428 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 KLRF1Q9NZS2 232 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 ERVW-1Q9UQF0 538 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 A0A0A0MRY4 1105 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 CPNE6O95741 557 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 FSHRP23945 695 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 SPESP1Q6UW49 350 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 FAM131AQ6UXB0 335 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 CERS2Q96G23 380 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 SPATA13Q96N96 652 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 WDR77Q9BQA1 342 aaPredicted RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF717Q9BY31 904 aaPredicted RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 SEC61A2Q9H9S3 476 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 BRD7Q9NPI1 651 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 PLAGL2Q9UPG8 496 aa11.15□□□□□ -0.63
PRPF40A-202ENST00000410080 E2F3O00716 465 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 BANF1O75531 89 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 IL12AP29459 219 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 LRRC17Q8N6Y2 441 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 CKAP2Q8WWK9 683 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 C1GALT1C1Q96EU7 318 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 VAT1Q99536 393 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 SPAG4Q9NPE6 437 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 HEBP2Q9Y5Z4 205 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 SALL1Q9NSC2 1324 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 C15orf38-AP3S2A0A0A6YYH1 394 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 GPR89AB7ZAQ6 455 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 H0YGN5 161 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 PAPSS1O43252 624 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 GPR89BP0CG08 455 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 MAPTP10636 758 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 HNRNPLP14866 589 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 DRD4P21917 467 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 GDI1P31150 447 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 TAF10Q12962 218 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 VASH1Q7L8A9 365 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ARPINQ7Z6K5 226 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF527Q8NB42 609 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 SLAIN1Q8ND83 568 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 CYB5D2Q8WUJ1 264 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 EBNA1BP2Q99848 306 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 HSD3B1P14060 373 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 GPM6BQ13491 265 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 PLEKHG4Q58EX7 1191 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 POLNQ7Z5Q5 900 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 TDRPQ86YL5 185 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms