RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 MDC1Q14676 2089 aaKnown RBP16.61■□□□□ 0.25
SCRN1-203ENST00000409570 MATN3O15232 486 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 BRAFP15056 766 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 CA4P22748 312 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 COL8A1P27658 744 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 ZNF165P49910 485 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 GALNT2Q10471 571 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 MMRN1Q13201 1228 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 SEPT7Q16181 437 aaKnown RBP16.61■□□□□ 0.25
SCRN1-203ENST00000409570 INSCQ1MX18 579 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 PRR30Q53SZ7 412 aaPredicted RBP16.61■□□□□ 0.25
SCRN1-203ENST00000409570 TDRD12Q587J7 1177 aaKnown RBP16.61■□□□□ 0.25
SCRN1-203ENST00000409570 PAPD7Q5XG87 772 aaKnown RBP16.61■□□□□ 0.25
SCRN1-203ENST00000409570 ZNF787Q6DD87 383 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 PWWP2BQ6NUJ5 590 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 FAM199XQ6PEV8 388 aaPredicted RBP16.61■□□□□ 0.25
SCRN1-203ENST00000409570 ABRAXAS1Q6UWZ7 409 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 ZNF571Q7Z3V5 609 aaPredicted RBP16.61■□□□□ 0.25
SCRN1-203ENST00000409570 CCHCR1Q8TD31 782 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 THAP4Q8WY91 577 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 SEC14L1Q92503 715 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 GPR87Q9BY21 358 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 HAUS4Q9H6D7 363 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 SLC40A1Q9NP59 571 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 CASS4Q9NQ75 786 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 POT1Q9NUX5 634 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 SEMA5BQ9P283 1151 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 AMACRQ9UHK6 382 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 RARRES3Q9UL19 164 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 DNAJC16Q9Y2G8 782 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 CCDC88CQ9P219 2028 aa16.61■□□□□ 0.25
SCRN1-203ENST00000409570 DIDO1Q9BTC0 2240 aaKnown RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 PDZK1P1A8MUH7 402 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 TCP11X1B4DZS4 312 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 ANKRD66B4E2M5 251 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 GPR89AB7ZAQ6 455 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■■□□□ 12.1
SCRN1-203ENST00000409570 MTA2O94776 668 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 SLC25A14O95258 325 aaPredicted RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 DDAH2O95865 285 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 HLA-DQB2P05538 268 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 GPR89BP0CG08 455 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 FOLR1P15328 257 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 ZNF7P17097 686 aaPredicted RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 PTPN4P29074 926 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 CCL11P51671 97 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 PPP1CAP62136 330 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 SLC25A11Q02978 314 aaKnown RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 MRPL49Q13405 166 aaKnown RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 IL10RAQ13651 578 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 GPR18Q14330 331 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 INPP5JQ15735 1006 aaPredicted RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 EIF2S3LQ2VIR3 472 aaKnown RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 ZNF569Q5MCW4 686 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 TIGD7Q6NT04 549 aaPredicted RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 IRGCQ6NXR0 463 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 GPR26Q8NDV2 337 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 FATE1Q969F0 183 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 ZDHHC12Q96GR4 267 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 SLC41A2Q96JW4 573 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 FCRL4Q96PJ5 515 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 MLPHQ9BV36 600 aaPredicted RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 SPATA16Q9BXB7 569 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 RAB33BQ9H082 229 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 MRPL47Q9HD33 250 aaKnown RBP16.6■□□□□ 0.25
SCRN1-203ENST00000409570 PDE7BQ9NP56 450 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 ACSS2Q9NR19 701 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
SCRN1-203ENST00000409570 IGHV5-51A0A0C4DH38 117 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 ARGFXA6NJG6 315 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 LRRC53A6NM62 1247 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 OR52A4PA6NMU1 304 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 KMOO15229 486 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 MMP2P08253 660 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 CD48P09326 243 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 RPL10P27635 214 aaKnown RBP16.59■□□□□ 0.25
SCRN1-203ENST00000409570 TUBB3Q13509 450 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 KCNAB1Q14722 419 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 PAFAH1B3Q15102 231 aaKnown RBP16.59■□□□□ 0.25
SCRN1-203ENST00000409570 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
SCRN1-203ENST00000409570 ALS2CLQ60I27 953 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 E4F1Q66K89 784 aaPredicted RBP16.59■□□□□ 0.25
SCRN1-203ENST00000409570 NCBP2-AS2Q69YL0 99 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
SCRN1-203ENST00000409570 CYB5D1Q6P9G0 228 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 WASH2PQ6VEQ5 465 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 SYVN1Q86TM6 617 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 LRRTM4Q86VH4 590 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 ZNF547Q8IVP9 402 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 Q8NA96 180 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 SIDT2Q8NBJ9 832 aaKnown RBP16.59■□□□□ 0.25
SCRN1-203ENST00000409570 FAM71BQ8TC56 605 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 LRRN4Q8WUT4 740 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 TSGA13Q96PP4 275 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 TIMM29Q9BSF4 260 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 ING2Q9H160 280 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 HSD3B7Q9H2F3 369 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 WASH6PQ9NQA3 447 aa16.59■□□□□ 0.25
SCRN1-203ENST00000409570 MYBL1P10243 752 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms