RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PTSQ03393 145 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 TBL3Q12788 808 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 GPM6BQ13491 265 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 RCN1Q15293 331 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 LRRC73Q5JTD7 316 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 PDE12Q6L8Q7 609 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 CHSY3Q70JA7 882 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 FRA10AC1Q70Z53 315 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 NXPE1Q8N323 547 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 OR2A12Q8NGT7 310 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 SORCS1Q8WY21 1168 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 SMG7Q92540 1137 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 PBXIP1Q96AQ6 731 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 UTP6Q9NYH9 597 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 ATP6AP2A0A1C7CYW4 349 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 CRCPO75575 148 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 ATP6AP2O75787 350 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 LHCGRP22888 699 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 HK3P52790 923 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 CCDC6Q16204 474 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 UGT3A2Q3SY77 523 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 PREPLQ4J6C6 727 aaPredicted RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 CELF5Q8N6W0 485 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 KYQ8NBH2 561 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 PDLIM5Q96HC4 596 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 TACO1Q9BSH4 297 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 EBF2Q9HAK2 575 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 CDH22Q9UJ99 828 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 DNAJC15Q9Y5T4 150 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 ZNF106Q9H2Y7 1883 aaKnown RBP20.47■□□□□ 0.87
USP39-203ENST00000409470 PRRC2BQ5JSZ5 2229 aaKnown RBP20.47■□□□□ 0.87
USP39-203ENST00000409470 PDE5AO76074 875 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 RGS4P49798 205 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 NAA20P61599 178 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 SQLEQ14534 574 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 DHCR24Q15392 516 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 TGFBIQ15582 683 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 WLSQ5T9L3 541 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 KANK2Q63ZY3 851 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 ICE2Q659A1 982 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 KIAA0907Q7Z7F0 614 aaPredicted RBP20.47■□□□□ 0.87
USP39-203ENST00000409470 C12orf76Q8N812 135 aaPredicted RBP20.47■□□□□ 0.87
USP39-203ENST00000409470 LKAAEAR1Q8TD35 194 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 KCNV2Q8TDN2 545 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 TWIST2Q8WVJ9 160 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 RCN3Q96D15 328 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 HTATIP2Q9BUP3 242 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 DUS2Q9NX74 493 aaKnown RBP20.47■□□□□ 0.87
USP39-203ENST00000409470 B4GALT6Q9UBX8 382 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 SLC8A2Q9UPR5 921 aa20.47■□□□□ 0.87
USP39-203ENST00000409470 TTC34A8MYJ7 566 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 WASH3PC4AMC7 463 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 FOXA1P55317 472 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 ACTR3P61158 418 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 FAM109BQ6ICB4 259 aaPredicted RBP20.46■□□□□ 0.87
USP39-203ENST00000409470 C16orf89Q6UX73 402 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 ADGRD2Q7Z7M1 963 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 ADAMTSL2Q86TH1 951 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 DDIASQ8IXT1 998 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 PLPP6Q8IY26 295 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 KCNA7Q96RP8 456 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 HEPHQ9BQS7 1158 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 C1QTNF3Q9BXJ4 246 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 NUDT4Q9NZJ9 180 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 PCTPQ9UKL6 214 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 CHD7Q9P2D1 2997 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 POU2F2P09086 479 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 GNAZP19086 355 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 ARHGEF7Q14155 803 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 RBBP7Q16576 425 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 TMC5Q6UXY8 1006 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 CYHR1Q6ZMK1 362 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 MACC1Q6ZN28 852 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 MYO1HQ8N1T3 1032 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 ZNF483Q8TF39 744 aaPredicted RBP20.46■□□□□ 0.87
USP39-203ENST00000409470 C3orf30Q96M34 536 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 LRRC3BQ96PB8 259 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 HGH1Q9BTY7 390 aa20.46■□□□□ 0.87
USP39-203ENST00000409470 PIP5K1BO14986 540 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 CCNT2O60583 730 aaKnown RBP20.45■□□□□ 0.86
USP39-203ENST00000409470 MLYCDO95822 493 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 S100BP04271 92 aaPredicted RBP20.45■□□□□ 0.86
USP39-203ENST00000409470 C1SP09871 688 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 ADH5P11766 374 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 DGKAP23743 735 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 ART3Q13508 389 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 ZDHHC20Q5W0Z9 365 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 TRIM68Q6AZZ1 485 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 PGM2L1Q6PCE3 622 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 BRAT1Q6PJG6 821 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 RFLNAQ6ZTI6 216 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 LARP4Q71RC2 724 aaKnown RBP eCLIP20.45■□□□□ 0.86
USP39-203ENST00000409470 DSELQ8IZU8 1212 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 ZBTB2Q8N680 514 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 DTX3LQ8TDB6 740 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 ESAMQ96AP7 390 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 MRGPRX3Q96LB0 322 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 MCOLN1Q9GZU1 580 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 EFCAB1Q9HAE3 211 aa20.45■□□□□ 0.86
USP39-203ENST00000409470 ZDHHC3Q9NYG2 299 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms