RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 C2orf27AQ580R0 203 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 UNC93B1Q9H1C4 597 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 TMEM27Q9HBJ8 222 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 IL36AQ9UHA7 158 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 ANXA4P09525 319 aaPredicted RBP24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 KLHL12Q53G59 568 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 OR2T12Q8NG77 320 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 IFT172Q9UG01 1749 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 ADSSP30520 456 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 TIE1P35590 1138 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 ENKURQ8TC29 256 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 DNASE1L2Q92874 299 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 EMID1Q96A84 441 aaPredicted RBP24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 NUS1Q96E22 293 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 PRICKLE1Q96MT3 831 aaPredicted RBP24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 PACSIN3Q9UKS6 424 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 APLP1P51693 650 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 LIMK2P53671 638 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 ALYREFQ86V81 257 aaKnown RBP24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 TWIST2Q8WVJ9 160 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 HMGB4Q8WW32 186 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 SLC9A6Q92581 669 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 EXOSC8Q96B26 276 aaKnown RBP24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 SEC14L3Q9UDX4 400 aa24.85■■□□□ 1.57
SPIRE1-202ENST00000409402 DHRS12A0PJE2 317 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 SRRM3A6NNA2 597 aaPredicted RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 MAP2K7O14733 419 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 CCNFP41002 786 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 AVPR1BP47901 424 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 PRPF19Q9UMS4 504 aaKnown RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 ABCC6O95255 1503 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 FOXM1Q08050 763 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 ERICH5Q6P6B1 374 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 RAB11FIP5Q9BXF6 653 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 BCL2L14Q9BZR8 327 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 NOCTQ9UK39 431 aaKnown RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 A0A1W2PQ45 241 aaPredicted RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 A0A1W2PQY0 241 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 H7C0S8 307 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 CCL22O00626 93 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 ZNF37AP17032 561 aaPredicted RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 SPIRE1Q08AE8 756 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 ADCY4Q8NFM4 1077 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 MFSD3Q96ES6 412 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 VNN1O95497 513 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 PIGRP01833 764 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 POLR2JP52435 117 aaKnown RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 COL9A3Q14050 684 aaPredicted RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 KLK6Q92876 244 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 TLR9Q9NR96 1032 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 ENPP3O14638 875 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 OGNP20774 298 aaKnown RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 ZYG11AQ6WRX3 759 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 XAGE5Q8WWM1 108 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 C12orf66Q96MD2 445 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 RHOBTB2Q9BYZ6 727 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 KCNN2Q9H2S1 579 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 POLR3BQ9NW08 1133 aaPredicted RBP24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 CNTN3Q9P232 1028 aa24.84■■□□□ 1.57
SPIRE1-202ENST00000409402 FAM155BO75949 473 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 CPSF7Q8N684 471 aaKnown RBP24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 CDADC1Q9BWV3 514 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 NUAK2Q9H093 628 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 LOC100506127A0A0U1RQW1 187 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 SNAP91O60641 907 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 LCA5LO95447 670 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 NMBRP28336 390 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 ACTR3P61158 418 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 ADGRF1Q5T601 910 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 UBR7Q8N806 425 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 RBM18Q96H35 190 aaKnown RBP24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 MYOM1P52179 1685 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 SCAMP1O15126 338 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 NRP2O60462 931 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 FAM163BP0C2L3 166 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 CLCQ05315 142 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 CHIT1Q13231 466 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 RTL4Q6ZR62 310 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 ZNF540Q8NDQ6 660 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 ZNF514Q96K75 400 aaPredicted RBP24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 SH3GL2Q99962 352 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 CXorf56Q9H5V9 222 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 SESN1Q9Y6P5 492 aa24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 ATXN2Q99700 1313 aaKnown RBP24.83■■□□□ 1.57
SPIRE1-202ENST00000409402 CFIP05156 583 aa24.83■■□□□ 1.56
SPIRE1-202ENST00000409402 SLC7A2P52569 658 aa24.83■■□□□ 1.56
SPIRE1-202ENST00000409402 RFX4Q33E94 735 aa24.83■■□□□ 1.56
SPIRE1-202ENST00000409402 ESRP1Q6NXG1 681 aaKnown RBP24.83■■□□□ 1.56
SPIRE1-202ENST00000409402 CLEC4CQ8WTT0 213 aa24.83■■□□□ 1.56
SPIRE1-202ENST00000409402 SIDT2Q8NBJ9 832 aaKnown RBP24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 ZCCHC10Q8TBK6 192 aa24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 EEF1AKMT1Q8WVE0 214 aa24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 OR2AG1Q9H205 316 aa24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 NRG1Q02297 640 aaPredicted RBP24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 MBLAC2Q68D91 279 aa24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 VANGL1Q8TAA9 524 aaPredicted RBP24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 DCUN1D5Q9BTE7 237 aa24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 FBXW2Q9UKT8 454 aa24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 ALOX12P18054 663 aa24.82■■□□□ 1.56
SPIRE1-202ENST00000409402 EIF2B3Q9NR50 452 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms