RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NLRP4Q96MN2 994 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 SH3GL2Q99962 352 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 ABHD6Q9BV23 337 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TUBB2BQ9BVA1 445 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 PPP1R3EQ9H7J1 279 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 DNAJC18Q9H819 358 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 COPS7BQ9H9Q2 264 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 MMP25Q9NPA2 562 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 PIH1D3Q9NQM4 214 aaKnown RBP4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 ACSS1Q9NUB1 689 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 SQORQ9Y6N5 450 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 GAGE12JA6NER3 117 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 SMTNL1A8MU46 457 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 M0QZ24 198 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 FMO6PO60774 539 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 TOMM70O94826 608 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 ALPLP05186 524 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 ACHEP22303 614 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 NR2F2P24468 414 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 HTR6P50406 440 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 CDH13P55290 713 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 ST3GAL1Q11201 340 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 PPP2R5CQ13362 524 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 PPIGQ13427 754 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 SLMAPQ14BN4 828 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 TYSND1Q2T9J0 566 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 MYLK3Q32MK0 819 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZRANB3Q5FWF4 1079 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 TMEM211Q6ICI0 200 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 LCN10Q6JVE6 187 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 PAPD4Q6PIY7 484 aaKnown RBP4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 INTS8Q75QN2 995 aaKnown RBP4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZSCAN30Q86W11 494 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 NAT8LQ8N9F0 302 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 ENGASEQ8NFI3 743 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 ARRDC2Q8TBH0 407 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 SLC35F5Q8WV83 523 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 PTP4A1Q93096 173 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 LRRC3BQ96PB8 259 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 NOL11Q9H8H0 719 aaKnown RBP4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 DBNDD1Q9H9R9 158 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 TSPYL4Q9UJ04 414 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 POMT1Q9Y6A1 747 aa4.88□□□□□ -1.63
HMGB1P13-201ENST00000406019 A0A087WV48 116 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 A0A1W2PPM1 405 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 OR6C76A6NM76 312 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 H0YAE9 185 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZWINTO95229 277 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 CELF2O95319 508 aaKnown RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 PENKP01210 267 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 KLKB1P03952 638 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 PTMAP06454 111 aaKnown RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 LINGO3P0C6S8 592 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 GNLYP22749 145 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 ARRB2P32121 409 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 P2RX3P56373 397 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 NEDD9Q14511 834 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 NSUN5P2Q63ZY6 315 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 IYDQ6PHW0 289 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 CENPVQ7Z7K6 275 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 CREBRFQ8IUR6 639 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZNF595Q8IYB9 648 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 CCDC170Q8IYT3 715 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 IQUBQ8NA54 791 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 OR1J2Q8NGS2 313 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 FIBINQ8TAL6 211 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 HM13Q8TCT9 377 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 CORO2AQ92828 525 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 SPACA9Q96E40 222 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 ERO1AQ96HE7 468 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 MARK4Q96L34 752 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 MGME1Q9BQP7 344 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 DNAI2Q9GZS0 605 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 TMEM39BQ9GZU3 492 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 CNOT10Q9H9A5 744 aaKnown RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 CLK4Q9HAZ1 481 aaKnown RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 FZD3Q9NPG1 666 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 SLC9A2Q9UBY0 812 aa4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 DBNLQ9UJU6 430 aaKnown RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 TMEM184BQ9Y519 407 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 ASTN2O75129 1339 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P13-201ENST00000406019 A0A0U1RQK1 487 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZNF320A2RRD8 509 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 ANXA2P2A6NMY6 339 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 DNM1LO00429 736 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 STX6O43752 255 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 VPREB1P12018 145 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 PFKFB1P16118 471 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 CASTP20810 708 aaKnown RBP4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 PIGAP37287 484 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 EIF2S3P41091 472 aaKnown RBP4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 TUBB4BP68371 445 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 GAD2Q05329 585 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 SCN1BQ07699 218 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 NFE2L1Q14494 772 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 PTPRCAPQ14761 206 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 PTGR1Q14914 329 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 MEP1BQ16820 701 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms