RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ARHGAP12Q8IWW6 846 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 SEC14L1Q92503 715 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 SLC39A13Q96H72 371 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 CCDC138Q96M89 665 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 OSBPL6Q9BZF3 934 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 BTBD1Q9H0C5 482 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ZNF576Q9H609 170 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 SOHLH2Q9NX45 425 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 GDE1Q9NZC3 331 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 PADI4Q9UM07 663 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 VPS4BO75351 444 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 VIPP01282 170 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ACP5P13686 325 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 NQO1P15559 274 aaKnown RBP9.01□□□□□ -0.97
LIG4-202ENST00000405925 PRKCHP24723 683 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 PTPN4P29074 926 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 S100A3P33764 101 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 CHI3L1P36222 383 aaPredicted RBP9.01□□□□□ -0.97
LIG4-202ENST00000405925 C21orf59P57076 290 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 TNK2Q07912 1038 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 FRG1Q14331 258 aaKnown RBP9.01□□□□□ -0.97
LIG4-202ENST00000405925 RIPOR1Q6ZS17 1223 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 TAF8Q7Z7C8 310 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 C17orf64Q86WR6 236 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 SCUBE1Q8IWY4 988 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 NAT14Q8WUY8 206 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ZSCAN5AQ9BUG6 496 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 SLC25A23Q9BV35 468 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 YY1AP1Q9H869 796 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 DNAJC11Q9NVH1 559 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 PIAS3Q9Y6X2 628 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 CNTRLQ7Z7A1 2325 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ATAD5Q96QE3 1844 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 CCDC154A6NI56 674 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ZMPSTE24O75844 475 aa9□□□□□ -0.97
LIG4-202ENST00000405925 RASSF9O75901 435 aa9□□□□□ -0.97
LIG4-202ENST00000405925 KLF8O95600 359 aaPredicted RBP9□□□□□ -0.97
LIG4-202ENST00000405925 AKT2P31751 481 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CD68P34810 354 aaPredicted RBP9□□□□□ -0.97
LIG4-202ENST00000405925 STC1P52823 247 aa9□□□□□ -0.97
LIG4-202ENST00000405925 WDR4P57081 412 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 SLC7A9P82251 487 aa9□□□□□ -0.97
LIG4-202ENST00000405925 TBL3Q12788 808 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 CNTN1Q12860 1018 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ZNF805Q5CZA5 627 aa9□□□□□ -0.97
LIG4-202ENST00000405925 EOGTQ5NDL2 527 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ZYG11AQ6WRX3 759 aa9□□□□□ -0.97
LIG4-202ENST00000405925 TRIM74Q86UV6 250 aa9□□□□□ -0.97
LIG4-202ENST00000405925 AMZ2Q86W34 360 aa9□□□□□ -0.97
LIG4-202ENST00000405925 TMPRSS6Q8IU80 811 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CNDP1Q96KN2 507 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ZNF641Q96N77 438 aaPredicted RBP9□□□□□ -0.97
LIG4-202ENST00000405925 RHBGQ9H310 441 aa9□□□□□ -0.97
LIG4-202ENST00000405925 IPPKQ9H8X2 491 aa9□□□□□ -0.97
LIG4-202ENST00000405925 KIF17Q9P2E2 1029 aa9□□□□□ -0.97
LIG4-202ENST00000405925 EIF2B4Q9UI10 523 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 SNX8Q9Y5X2 465 aa9□□□□□ -0.97
LIG4-202ENST00000405925 SMAD6O43541 496 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 DNAJC8O75937 253 aaPredicted RBP9□□□□□ -0.97
LIG4-202ENST00000405925 PAK4O96013 591 aaPredicted RBP9□□□□□ -0.97
LIG4-202ENST00000405925 F11P03951 625 aa9□□□□□ -0.97
LIG4-202ENST00000405925 KLKB1P03952 638 aa9□□□□□ -0.97
LIG4-202ENST00000405925 PROCP04070 461 aa9□□□□□ -0.97
LIG4-202ENST00000405925 SRCP12931 536 aa9□□□□□ -0.97
LIG4-202ENST00000405925 HNF1BP35680 557 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ACTR1BP42025 376 aa9□□□□□ -0.97
LIG4-202ENST00000405925 GRIA2P42262 883 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ACTR1AP61163 376 aa9□□□□□ -0.97
LIG4-202ENST00000405925 TP53BP2Q13625 1128 aa9□□□□□ -0.97
LIG4-202ENST00000405925 SF1Q15637 639 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 GPRC6AQ5T6X5 926 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CILP2Q8IUL8 1156 aa9□□□□□ -0.97
LIG4-202ENST00000405925 GFM2Q969S9 779 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 EME1Q96AY2 570 aa9□□□□□ -0.97
LIG4-202ENST00000405925 FAM120BQ96EK7 910 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 SHDQ96IW2 340 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CDH19Q9H159 772 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CARS2Q9HA77 564 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 SLC40A1Q9NP59 571 aa9□□□□□ -0.97
LIG4-202ENST00000405925 PCDH12Q9NPG4 1184 aa9□□□□□ -0.97
LIG4-202ENST00000405925 TRPC4Q9UBN4 977 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CROTQ9UKG9 612 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CASP8AP2Q9UKL3 1982 aa9□□□□□ -0.97
LIG4-202ENST00000405925 A0A0J9YYE9 177 aa9□□□□□ -0.97
LIG4-202ENST00000405925 A0A1W2PP55 124 aa9□□□□□ -0.97
LIG4-202ENST00000405925 MYO1GB0I1T2 1018 aa9□□□□□ -0.97
LIG4-202ENST00000405925 E7ESA3 106 aa9□□□□□ -0.97
LIG4-202ENST00000405925 PAPSS2O95340 614 aaPredicted RBP9□□□□□ -0.97
LIG4-202ENST00000405925 TRBC1P01850 177 aa9□□□□□ -0.97
LIG4-202ENST00000405925 PFKLP17858 780 aa9□□□□□ -0.97
LIG4-202ENST00000405925 NAA20P61599 178 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CYP4F2P78329 520 aa9□□□□□ -0.97
LIG4-202ENST00000405925 KRT72Q14CN4 511 aa9□□□□□ -0.97
LIG4-202ENST00000405925 TMEM259Q4ZIN3 620 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CLEC6AQ6EIG7 209 aa9□□□□□ -0.97
LIG4-202ENST00000405925 HTR3DQ70Z44 454 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ALYREFQ86V81 257 aaKnown RBP9□□□□□ -0.97
LIG4-202ENST00000405925 ZNF614Q8N883 585 aa9□□□□□ -0.97
LIG4-202ENST00000405925 CHST14Q8NCH0 376 aa9□□□□□ -0.97
LIG4-202ENST00000405925 ZNF514Q96K75 400 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms