RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 ERLEC1Q96DZ1 483 aa13.15□□□□□ -0.31
CEACAM1-206ENST00000403136 LINGO1Q96FE5 620 aa13.15□□□□□ -0.31
CEACAM1-206ENST00000403136 COQ10AQ96MF6 247 aa13.15□□□□□ -0.31
CEACAM1-206ENST00000403136 LRRC37BQ96QE4 947 aa13.15□□□□□ -0.31
CEACAM1-206ENST00000403136 WRAP53Q9BUR4 548 aaKnown RBP13.15□□□□□ -0.31
CEACAM1-206ENST00000403136 LIMD1Q9UGP4 676 aa13.15□□□□□ -0.31
CEACAM1-206ENST00000403136 RAP2CQ9Y3L5 183 aa13.15□□□□□ -0.31
CEACAM1-206ENST00000403136 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 BTN3A1O00481 513 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 CHRNGP07510 517 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 MTHFD2P13995 350 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 CTHP32929 405 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 TIE1P35590 1138 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 SERPINB5P36952 375 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 CCR10P46092 362 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 PSMD8P48556 350 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 SEC13P55735 322 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 NFKB2Q00653 900 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 CCDC15Q0P6D6 951 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 TSNQ15631 228 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 GALNTL6Q49A17 601 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 TMEM52BQ4KMG9 183 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 SLC44A3Q8N4M1 653 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 ZNF781Q8N8C0 355 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 GBP7Q8N8V2 638 aaPredicted RBP13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 LKAAEAR1Q8TD35 194 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 BTN2A2Q8WVV5 523 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 RAB7BQ96AH8 199 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 AP2M1Q96CW1 435 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 DCUN1D1Q96GG9 259 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 TMEM237Q96Q45 408 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 RSPH9Q9H1X1 276 aaPredicted RBP13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 KCNK12Q9HB15 430 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 SPATS2LQ9NUQ6 558 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 KLHL42Q9P2K6 505 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 HEY2Q9UBP5 337 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 HAO1Q9UJM8 370 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 RNF112Q9ULX5 631 aa13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.14□□□□□ -0.31
CEACAM1-206ENST00000403136 DENND4AQ7Z401 1863 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 KIAA1549LQ6ZVL6 1849 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 SCN8AQ9UQD0 1980 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 MUC22E2RYF6 1773 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 FADS2P1A8MWK0 482 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 ANKRD65E5RJM6 399 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 UBXN8O00124 270 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 NEMP1O14524 444 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 HGSO14964 777 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 MBTPS2O43462 519 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 SYNCRIPO60506 623 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 RNASEH1O60930 286 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 SNUPNO95149 360 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 OR56A5P0C7T3 313 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 ATP1B2P14415 290 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 DGKAP23743 735 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 P2RY2P41231 377 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 SATB1Q01826 763 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 CREB5Q02930 508 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 CNTN1Q12860 1018 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 PRKAA1Q13131 559 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 CYP2U1Q7Z449 544 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 MTDHQ86UE4 582 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 FUBP1Q96AE4 644 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 L3HYPDHQ96EM0 354 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 DTD2Q96FN9 168 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 PANX3Q96QZ0 392 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 SPTBN5Q9NRC6 3674 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 TCF20Q9UGU0 1960 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 F5P12259 2224 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
CEACAM1-206ENST00000403136 NPEPPSL1A6NEC2 478 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 SYCE1LA8MT33 242 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 ZNF195O14628 629 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 MMP20O60882 483 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 RECQL5O94762 991 aaPredicted RBP13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 UBOX5O94941 541 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 RGS4P49798 205 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 RPL14P50914 215 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 CRY1Q16526 586 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 PFKFB4Q16877 469 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 ZNF678Q5SXM1 525 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 RAB44Q7Z6P3 723 aaPredicted RBP13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 ZBTB2Q8N680 514 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 PTGR2Q8N8N7 351 aaPredicted RBP13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 DDHD1Q8NEL9 900 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 EXT2Q93063 718 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 VPS35Q96QK1 796 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 WWP1Q9H0M0 922 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 MYLK2Q9H1R3 596 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 C8orf33Q9H7E9 229 aaPredicted RBP13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 ZDHHC2Q9UIJ5 367 aa13.12□□□□□ -0.31
CEACAM1-206ENST00000403136 FADS3Q9Y5Q0 445 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms