RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 COPS8Q99627 209 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 IL21RQ9HBE5 538 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 CYP4F12Q9HCS2 524 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 SUFUQ9UMX1 484 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 ST14Q9Y5Y6 855 aa15.76■□□□□ 0.11
HMGA1-204ENST00000401473 PRSS38A1L453 326 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 CXorf49A8MYA2 514 aaPredicted RBP15.75■□□□□ 0.11
HMGA1-204ENST00000401473 TNFRSF10CO14798 259 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 CHUKO15111 745 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 NUAK1O60285 661 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 LRP3O75074 770 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 CSF2P04141 144 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 GABRB3P28472 473 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 HK3P52790 923 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 CTSCP53634 463 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 THOC5Q13769 683 aaKnown RBP15.75■□□□□ 0.11
HMGA1-204ENST00000401473 HLA-BQ31612 363 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 CERS6Q6ZMG9 384 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 DET1Q7L5Y6 550 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 PARGQ86W56 976 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 ULK4Q96C45 1275 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 NUSAP1Q9BXS6 441 aaKnown RBP15.75■□□□□ 0.11
HMGA1-204ENST00000401473 ERVMER34-1Q9H9K5 563 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 TM7SF3Q9NS93 570 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 VPS18Q9P253 973 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 MOSPD1Q9UJG1 213 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 PRSS21Q9Y6M0 314 aa15.75■□□□□ 0.11
HMGA1-204ENST00000401473 VEGFDO43915 354 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 ACSL3O95573 720 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 S1PR4O95977 384 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 ATP1B2P14415 290 aaPredicted RBP15.74■□□□□ 0.11
HMGA1-204ENST00000401473 ENGP17813 658 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 KELP23276 732 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 SLC1A2P43004 574 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 PPARDQ03181 441 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 SLMAPQ14BN4 828 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 SHBQ15464 509 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 TYSND1Q2T9J0 566 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 PYCR3Q53H96 274 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 MRNIPQ6NTE8 343 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 HID1Q8IV36 788 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 CNTN4Q8IWV2 1026 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 RBFAQ8N0V3 343 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 FBF1Q8TES7 1133 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■■ 56.2
HMGA1-204ENST00000401473 TTC25Q96NG3 672 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 ELF4Q99607 663 aaPredicted RBP15.74■□□□□ 0.11
HMGA1-204ENST00000401473 EPB41L4BQ9H329 900 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 DNAJC28Q9NX36 388 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 KLQ9UEF7 1012 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 PSAT1Q9Y617 370 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 DGKBQ9Y6T7 804 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 OR2AG2A6NM03 316 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 GDF9O60383 454 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 HAUS5O94927 633 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 AHSGP02765 367 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 PMLP29590 882 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 AKT1P31749 480 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 TTPAP49638 278 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 BNIP3Q12983 259 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 PRR23CQ6ZRP0 262 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 CEP128Q6ZU80 1094 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 C11orf96Q7Z7L8 435 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 SDCCAG8Q86SQ7 713 aaPredicted RBP15.74■□□□□ 0.11
HMGA1-204ENST00000401473 OTUD6BQ8N6M0 293 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 BEND7Q8N7W2 519 aaPredicted RBP15.74■□□□□ 0.11
HMGA1-204ENST00000401473 TMEM168Q9H0V1 697 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 GAREM1Q9H706 876 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 VPS37BQ9H9H4 285 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 CARS2Q9HA77 564 aaKnown RBP15.74■□□□□ 0.11
HMGA1-204ENST00000401473 GULP1Q9UBP9 304 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 SLC23A2Q9UGH3 650 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 ZNHIT2Q9UHR6 403 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 FBXO5Q9UKT4 447 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 CRYL1Q9Y2S2 319 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 PLEKHM1Q9Y4G2 1056 aa15.74■□□□□ 0.11
HMGA1-204ENST00000401473 CTIFO43310 598 aaKnown RBP15.73■□□□□ 0.11
HMGA1-204ENST00000401473 IVLP07476 585 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 GSTA2P09210 222 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 NME1P15531 152 aaKnown RBP15.73■□□□□ 0.11
HMGA1-204ENST00000401473 JUNDP17535 347 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 MSH3P20585 1137 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 NSG1P42857 185 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 PMS2P54278 862 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 MPP1Q00013 466 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 MGAT5Q09328 741 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 TCEA2Q15560 299 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 LYPLAL1Q5VWZ2 237 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 TMEM220Q6QAJ8 160 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 C2CD4AQ8NCU7 369 aaPredicted RBP15.73■□□□□ 0.11
HMGA1-204ENST00000401473 CCL4L1Q8NHW4 92 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 CALML6Q8TD86 181 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 AENQ8WTP8 325 aaKnown RBP15.73■□□□□ 0.11
HMGA1-204ENST00000401473 LPGAT1Q92604 370 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.73■□□□□ 0.114e-6■■■■■ 48.1
HMGA1-204ENST00000401473 BIRC8Q96P09 236 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 TCF12Q99081 682 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 FBXO6Q9NRD1 293 aaPredicted RBP15.73■□□□□ 0.11
HMGA1-204ENST00000401473 RABGEF1Q9UJ41 708 aa15.73■□□□□ 0.11
HMGA1-204ENST00000401473 FAM159BA6NKW6 160 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms