RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PACS1Q6VY07 963 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 RD3Q7Z3Z2 195 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 SERPINA9Q86WD7 417 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 GPR150Q8NGU9 434 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 RHBDD1Q8TEB9 315 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 SETD7Q8WTS6 366 aaKnown RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 STAMBPL1Q96FJ0 436 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 LINC00615Q96LM1 132 aaPredicted RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 EBNA1BP2Q99848 306 aaKnown RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 TRIM31Q9BZY9 425 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 TMEM168Q9H0V1 697 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 SUDS3Q9H7L9 328 aaPredicted RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 MOSPD1Q9UJG1 213 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 YY2O15391 372 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 AP2A2O94973 939 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 POLBP06746 335 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 MSH3P20585 1137 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 NMBRP28336 390 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 FRG1Q14331 258 aaKnown RBP17.44■□□□□ 0.38
CTNS-203ENST00000399306 KCTD19Q17RG1 926 aaPredicted RBP17.44■□□□□ 0.38
CTNS-203ENST00000399306 KHDC1Q4VXA5 237 aaKnown RBP17.44■□□□□ 0.38
CTNS-203ENST00000399306 FASTKD1Q53R41 847 aaKnown RBP17.44■□□□□ 0.38
CTNS-203ENST00000399306 OGFOD3Q6PK18 319 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 PIANPQ8IYJ0 282 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 OR6P1Q8NGX9 317 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 ART4Q93070 314 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 MFSD3Q96ES6 412 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 DCUN1D1Q96GG9 259 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 TCF12Q99081 682 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 LRRC1Q9BTT6 524 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 BOCQ9BWV1 1114 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 GRHL1Q9NZI5 618 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 ZNHIT2Q9UHR6 403 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 DOLKQ9UPQ8 538 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 BTBD3Q9Y2F9 522 aa17.44■□□□□ 0.38
CTNS-203ENST00000399306 ZCWPW2A0A1B0GU75 182 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 PRR19A6NJB7 356 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 CCL22O00626 93 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 PFDN6O15212 129 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 TNFSF14O43557 240 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 LDOC1O95751 146 aaPredicted RBP17.43■□□□□ 0.38
CTNS-203ENST00000399306 ATP1B2P14415 290 aaPredicted RBP17.43■□□□□ 0.38
CTNS-203ENST00000399306 VCLP18206 1134 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 PGAM1P18669 254 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 AKT1P31749 480 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 NSG1P42857 185 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 ARCN1P48444 511 aaKnown RBP17.43■□□□□ 0.38
CTNS-203ENST00000399306 TTPAP49638 278 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 DUSP3P51452 185 aaPredicted RBP17.43■□□□□ 0.38
CTNS-203ENST00000399306 CTBSQ01459 385 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 DHX9Q08211 1270 aaKnown RBP17.43■□□□□ 0.38
CTNS-203ENST00000399306 DMPKQ09013 629 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 PROX2Q3B8N5 592 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 FNBP1LQ5T0N5 605 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 MRNIPQ6NTE8 343 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 TAF8Q7Z7C8 310 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 NRROSQ86YC3 692 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 AGGF1Q8N302 714 aaeCLIP17.43■□□□□ 0.38
CTNS-203ENST00000399306 EID2Q8N6I1 236 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 RASGEF1AQ8N9B8 481 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 OR6C4Q8NGE1 309 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 GABPB2Q8TAK5 448 aaPredicted RBP17.43■□□□□ 0.38
CTNS-203ENST00000399306 FAM114A2Q9NRY5 505 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 CATSPERZQ9NTU4 200 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 FTSJ1Q9UET6 329 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 GPSM3Q9Y4H4 160 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 TEX264Q9Y6I9 313 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 RPS6KL1Q9Y6S9 549 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 FAM169AQ9Y6X4 670 aa17.43■□□□□ 0.38
CTNS-203ENST00000399306 C17orf113A0A1B0GUU1 675 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 TRIM38O00635 465 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 CD3EAPO15446 510 aaKnown RBP17.42■□□□□ 0.38
CTNS-203ENST00000399306 GPR39O43194 453 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 CDK4P11802 303 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 ZNF7P17097 686 aaPredicted RBP17.42■□□□□ 0.38
CTNS-203ENST00000399306 OGNP20774 298 aaKnown RBP17.42■□□□□ 0.38
CTNS-203ENST00000399306 ARNTP27540 789 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 CA5AP35218 305 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 ID4P47928 161 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 RPIAP49247 311 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 B4GALNT1Q00973 533 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 ILKQ13418 452 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 C1orf61Q13536 156 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 DBN1Q16643 649 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 SPANXN3Q5MJ09 141 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 RNF187Q5TA31 235 aaPredicted RBP17.42■□□□□ 0.38
CTNS-203ENST00000399306 PSAPL1Q6NUJ1 521 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 MARK2Q7KZI7 788 aaKnown RBP17.42■□□□□ 0.38
CTNS-203ENST00000399306 TAS2R42Q7RTR8 314 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 C11orf96Q7Z7L8 435 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 ZNF547Q8IVP9 402 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 NOA1Q8NC60 698 aaKnown RBP17.42■□□□□ 0.38
CTNS-203ENST00000399306 CALML6Q8TD86 181 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 ZNF669Q96BR6 464 aaPredicted RBP17.42■□□□□ 0.38
CTNS-203ENST00000399306 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 DPH5Q9H2P9 285 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 VPS37BQ9H9H4 285 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 VPS9D1Q9Y2B5 631 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 MAD1L1Q9Y6D9 718 aa17.42■□□□□ 0.38
CTNS-203ENST00000399306 CCDC78A2IDD5 438 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms