RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 TIAL1Q01085 375 aaKnown RBP eCLIP13.86□□□□□ -0.195e-7■■■□□ 15.7
APOB-202ENST00000399256 EMX2Q04743 252 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 YWHAHQ04917 246 aaPredicted RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 CD47Q08722 323 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 KCNJ8Q15842 424 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 CRY1Q16526 586 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 RAB41Q5JT25 222 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TAPT1Q6NXT6 567 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TFAP2DQ7Z6R9 452 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 ZDHHC13Q8IUH4 622 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 DCBLD1Q8N8Z6 715 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 STARD8Q92502 1023 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 LRRC3Q9BY71 257 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 CARS2Q9HA77 564 aaKnown RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 SUN2Q9UH99 717 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 PDCD11Q14690 1871 aaKnown RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 A8MU76 341 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 HHLA1C9JL84 531 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 MSI1O43347 362 aaKnown RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 UGT2B11O75310 529 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 PAGE1O75459 146 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 MOCS2O96007 188 aaPredicted RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 FDXRP22570 491 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 INAQ16352 499 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 ANKRD13BQ86YJ7 626 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TTC30BQ8N4P2 665 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 ZNF555Q8NEP9 628 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 OR2T11Q8NH01 316 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 FBXO30Q8TB52 745 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 NDNFQ8TB73 568 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 SDCCAG3Q96C92 435 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TBATAQ96M53 351 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 ZFP42Q96MM3 310 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 KLHL5Q96PQ7 755 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 GABRDO14764 452 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 UGT2B4P06133 528 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 CCR1P32246 355 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 RCVRNP35243 200 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 CHRNB3Q05901 458 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 LCP2Q13094 533 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 FAM98BQ52LJ0 330 aaKnown RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 PAGE2BQ5JRK9 111 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TMEM236Q5W0B7 351 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 SPATA19Q7Z5L4 167 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 ABI1Q8IZP0 508 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TMEM40Q8WWA1 233 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 ATOH8Q96SQ7 321 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 PSD2Q9BQI7 771 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 MFSD1Q9H3U5 465 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 PAK1IP1Q9NWT1 392 aaPredicted RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 MAGEL2Q9UJ55 1249 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 UTS2RQ9UKP6 389 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
APOB-202ENST00000399256 SLC7A4O43246 635 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 NDUFS2O75306 463 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 RAP2AP10114 183 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 KCNE1P15382 129 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 ZNF37AP17032 561 aaPredicted RBP13.85□□□□□ -0.19
APOB-202ENST00000399256 TGM1P22735 817 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 SLC26A3P40879 764 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 DSC2Q02487 901 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 KCNAB2Q13303 367 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 TTC23Q5W5X9 447 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 LAIR2Q6ISS4 152 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 ENPP6Q6UWR7 440 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 FBXO39Q8N4B4 442 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 OR7A2PQ8NGA2 310 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 SENP8Q96LD8 212 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 UNCXA6NJT0 531 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 SNX2O60749 519 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 NADKO95544 446 aaPredicted RBP13.85□□□□□ -0.19
APOB-202ENST00000399256 ANXA6P08133 673 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 ENO2P09104 434 aaPredicted RBP13.85□□□□□ -0.19
APOB-202ENST00000399256 SLC2A3P11169 496 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 BMP4P12644 408 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 FSHRP23945 695 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 SEMA3AQ14563 771 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 IHHQ14623 411 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 SYVN1Q86TM6 617 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 HID1Q8IV36 788 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 FIG4Q92562 907 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 GLMNQ92990 594 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 ESAMQ96AP7 390 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 AURKBQ96GD4 344 aaPredicted RBP13.85□□□□□ -0.19
APOB-202ENST00000399256 FCRL2Q96LA5 508 aaPredicted RBP13.85□□□□□ -0.19
APOB-202ENST00000399256 NODALQ96S42 347 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 KLQ9UEF7 1012 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 NUDT5Q9UKK9 219 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 IKZF3Q9UKT9 509 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 RNF112Q9ULX5 631 aa13.85□□□□□ -0.19
APOB-202ENST00000399256 NYNRINQ9P2P1 1898 aaKnown RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 MIA3Q5JRA6 1907 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 TYW5A2RUC4 315 aaKnown RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 M0R3G1 203 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ENPP3O14638 875 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 VPS4BO75351 444 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 MYO1DO94832 1006 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PRSS56P0CW18 603 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 DARSP14868 501 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms