RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PCDHA10Q9Y5I2 948 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 TEX51A0A1B0GUA7 166 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 HS6ST1O60243 411 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 FADS2O95864 444 aaKnown RBP14.91□□□□□ -0.02
CYLD-202ENST00000398568 TNNC2P02585 160 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 TCF3P15923 654 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 DNAJB1P25685 340 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 ARL4AP40617 200 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 NDST1P52848 882 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 CDH8P55286 799 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 OLIG2Q13516 323 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 ZNF460Q14592 562 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 ZNF667Q5HYK9 610 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 TSTD2Q5T7W7 516 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 CLEC6AQ6EIG7 209 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 GLRX5Q86SX6 157 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 ZC3HC1Q86WB0 502 aaKnown RBP14.91□□□□□ -0.02
CYLD-202ENST00000398568 CPXCR1Q8N123 301 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 LRRC20Q8TCA0 184 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 TMEM125Q96AQ2 219 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 MRPL9Q9BYD2 267 aaKnown RBP14.91□□□□□ -0.02
CYLD-202ENST00000398568 VPS4AQ9UN37 437 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 POLHQ9Y253 713 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 PCDHGB6Q9Y5F9 930 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 METTL15A6NJ78 407 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 FXYD1O00168 92 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 ARHGEF15O94989 841 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 ASPAP45381 313 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 UGP2Q16851 508 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 MTERF2Q49AM1 385 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 GLYATQ6IB77 296 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 SLC26A9Q7LBE3 791 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 RNF135Q8IUD6 432 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 OR8H2Q8N162 312 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 GTF2H4Q92759 462 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 P2RY11Q96G91 374 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 CEP19Q96LK0 163 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 TEX13BQ9BXU2 312 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 NTN4Q9HB63 628 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 IPPQ9Y573 584 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 PCDHA9Q9Y5H5 950 aa14.91□□□□□ -0.02
CYLD-202ENST00000398568 TULP3O75386 442 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 PRKACAP17612 351 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 ENPP1P22413 925 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 FSHRP23945 695 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 BACE1P56817 501 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 TARDBPQ13148 414 aaKnown RBP eCLIP14.9□□□□□ -0.02
CYLD-202ENST00000398568 PYCR3Q53H96 274 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 SYT6Q5T7P8 510 aaPredicted RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 LARP4Q71RC2 724 aaKnown RBP eCLIP14.9□□□□□ -0.02
CYLD-202ENST00000398568 PTRH1Q86Y79 214 aaKnown RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 ITFG1Q8TB96 612 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 C19orf60Q96EN9 201 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 RBM4BQ9BQ04 359 aaKnown RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 RBM4Q9BWF3 364 aaKnown RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 SMOC2Q9H3U7 446 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 FBXL12Q9NXK8 326 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 MKLN1Q9UL63 735 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 SIPA1L1O43166 1804 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 HMX3A6NHT5 357 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 SHOXO15266 292 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 PGLSO95336 258 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 BDNFP23560 247 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 TGFBR1P36897 503 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 VEGFBP49765 207 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 PLK1P53350 603 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 MAP3K7CLP57077 242 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 EEFSECP57772 596 aaKnown RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 PRKCDQ05655 676 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 SPRYD7Q5W111 196 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 FAM122CQ6P4D5 195 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 RPS27LQ71UM5 84 aaKnown RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 CNIH3Q8TBE1 160 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 ABI2Q9NYB9 513 aaPredicted RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 NUP50Q9UKX7 468 aa14.9□□□□□ -0.02
CYLD-202ENST00000398568 ZFC3H1O60293 1989 aaKnown RBP14.9□□□□□ -0.02
CYLD-202ENST00000398568 PDPK1O15530 556 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 CNTN5O94779 1100 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 RAP2AP10114 183 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 NAGAP17050 411 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 PIGAP37287 484 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 SLC15A1P46059 708 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 POLD2P49005 469 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 KCNK10P57789 538 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 FAM214AQ32MH5 1076 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 ESCO2Q56NI9 601 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 RBM23Q86U06 439 aaKnown RBP14.89□□□□□ -0.03
CYLD-202ENST00000398568 DCP1BQ8IZD4 617 aaKnown RBP14.89□□□□□ -0.03
CYLD-202ENST00000398568 BRSK1Q8TDC3 778 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 PHF21BQ96EK2 531 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 CSPG4P5Q96PW8 444 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 AMBRA1Q9C0C7 1298 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 ACOXLQ9NUZ1 547 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 ZNF487B1APH4 448 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 AIREO43918 545 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 EPN2O95208 641 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 ALDOCP09972 364 aaKnown RBP14.89□□□□□ -0.03
CYLD-202ENST00000398568 IFI30P13284 250 aa14.89□□□□□ -0.03
CYLD-202ENST00000398568 ATF4P18848 351 aaPredicted RBP14.89□□□□□ -0.03
CYLD-202ENST00000398568 RGS7P49802 495 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms