RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MYBPC1Q00872 1141 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GSTM4Q03013 218 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ILF2Q12905 390 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 BFSP2Q13515 415 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TAS2R42Q7RTR8 314 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 FAM126BQ8IXS8 530 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PDZD8Q8NEN9 1154 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PIP4K2CQ8TBX8 421 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PPWD1Q96BP3 646 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PLD4Q96BZ4 506 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GPATCH1Q9BRR8 931 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HMX1Q9NP08 348 aaPredicted RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SDR39U1Q9NRG7 319 aaPredicted RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TRPM5Q9NZQ8 1165 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 NDUFAF1Q9Y375 327 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SYCE1LA8MT33 242 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TIPRLO75663 272 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 EMP3P54852 163 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GRAMD4Q6IC98 578 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 KIAA1841Q6NSI8 718 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HMBOX1Q6NT76 420 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CARNMT1Q8N4J0 409 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 NKAPQ8N5F7 415 aaKnown RBP18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CD200R1Q8TD46 325 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GAB3Q8WWW8 586 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 VPS33AQ96AX1 596 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HSPBAP1Q96EW2 488 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CIB1Q99828 191 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TMEM175Q9BSA9 504 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HGH1Q9BTY7 390 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ADGRE3Q9BY15 652 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MRPL9Q9BYD2 267 aaKnown RBP18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 LZTS1Q9Y250 596 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 FCF1Q9Y324 198 aaKnown RBP18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PCDHB9Q9Y5E1 797 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 FXYD1O00168 92 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HOXD10P28358 340 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SLC7A1P30825 629 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TTPAP49638 278 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CCL23P55773 120 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 DCTN2Q13561 401 aaKnown RBP18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TAF12Q16514 161 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 RBBP7Q16576 425 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 USP41Q3LFD5 358 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ATXN7L2Q5T6C5 722 aaPredicted RBP18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 RBM44Q6ZP01 1051 aaKnown RBP18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CDK15Q96Q40 435 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SLC29A1Q99808 456 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CLSTN3Q9BQT9 956 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PCTPQ9UKL6 214 aa18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CNOT6Q9ULM6 557 aaKnown RBP18.17■□□□□ 0.5
CHRFAM7A-202ENST00000397827 BBIP1A8MTZ0 92 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 E5RI56 91 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ATP6V1B1P15313 513 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SOX11P35716 441 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 KLHDC10Q6PID8 442 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PRPF18Q99633 342 aaKnown RBP18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CD274Q9NZQ7 290 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 EIF2B4Q9UI10 523 aaKnown RBP18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 H0Y626 953 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 VILLO15195 856 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 IDO1P14902 403 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CTPS1P17812 591 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 IL2P60568 153 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CHST9Q7L1S5 443 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 OR6K2Q8NGY2 324 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 DIS3LQ8TF46 1054 aaKnown RBP18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PBXIP1Q96AQ6 731 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 EID2BQ96D98 161 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PHF12Q96QT6 1004 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 C1orf50Q9BV19 199 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GPR45Q9Y5Y3 372 aa18.16■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ALPIP09923 528 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HSPA8P11142 646 aaKnown RBP18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CKMT2P17540 419 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TMEM53Q6P2H8 277 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GPSM1Q86YR5 675 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SPPL2CQ8IUH8 684 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TTC30BQ8N4P2 665 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 OR2T11Q8NH01 316 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CWH43Q9H720 699 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CMTM6Q9NX76 183 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 NDUFA13Q9P0J0 144 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 AURKCQ9UQB9 309 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HOXA2O43364 376 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SNX2O60749 519 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TBL1XO60907 577 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 BAIAP3O94812 1187 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ESRRBO95718 433 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CYBBP04839 570 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TFAP2AP05549 437 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CES1P23141 567 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SLC6A2P23975 617 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 IKBKEQ14164 716 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 C18orf21Q32NC0 220 aaPredicted RBP18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 KLHL35Q6PF15 583 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 NCEH1Q6PIU2 408 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms