RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
RPA3-202ENST00000396682 CROTQ9UKG9 612 aa13.07□□□□□ -0.32
RPA3-202ENST00000396682 TP53TG5Q9Y2B4 290 aa13.07□□□□□ -0.32
RPA3-202ENST00000396682 DNAJC16Q9Y2G8 782 aa13.07□□□□□ -0.32
RPA3-202ENST00000396682 ZNF711Q9Y462 761 aa13.07□□□□□ -0.32
RPA3-202ENST00000396682 KCNMB2Q9Y691 235 aa13.07□□□□□ -0.32
RPA3-202ENST00000396682 C3orf70A6NLC5 250 aaPredicted RBP13.06□□□□□ -0.32
RPA3-202ENST00000396682 OR52A4PA6NMU1 304 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 AURKAO14965 403 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 TOX3O15405 576 aaPredicted RBP13.06□□□□□ -0.32
RPA3-202ENST00000396682 MTA2O94776 668 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 VIPP01282 170 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 SLC4A1P02730 911 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 KRT7P08729 469 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 ZNF7P17097 686 aaPredicted RBP13.06□□□□□ -0.32
RPA3-202ENST00000396682 BPIP17213 487 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 RPL10P27635 214 aaKnown RBP13.06□□□□□ -0.32
RPA3-202ENST00000396682 CAPZBP47756 277 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 INSCQ1MX18 579 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 LACTB2Q53H82 288 aaPredicted RBP13.06□□□□□ -0.32
RPA3-202ENST00000396682 PDPK2PQ6A1A2 396 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 SLC9A4Q6AI14 798 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 CAVIN1Q6NZI2 390 aaKnown RBP13.06□□□□□ -0.32
RPA3-202ENST00000396682 ABRAXAS1Q6UWZ7 409 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 C11orf96Q7Z7L8 435 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 TMEM135Q86UB9 458 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 LRRTM4Q86VH4 590 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 ELMO2Q96JJ3 720 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 MAGEE1Q9HCI5 957 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 SLC40A1Q9NP59 571 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 UVRAGQ9P2Y5 699 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 PLAAQ9Y263 795 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 KCTD3Q9Y597 815 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 HEY1Q9Y5J3 304 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 SPO11Q9Y5K1 396 aa13.06□□□□□ -0.32
RPA3-202ENST00000396682 UTP20O75691 2785 aaKnown RBP13.05□□□□□ -0.32
RPA3-202ENST00000396682 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 PDZK1P1A8MUH7 402 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 KMOO15229 486 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 KIAA0754O94854 1291 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 TIAF1O95411 115 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 AMD1P17707 334 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
RPA3-202ENST00000396682 PPP1CAP62136 330 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 AP1B1Q10567 949 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 GPR18Q14330 331 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 IL11RAQ14626 422 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 PCSK7Q16549 785 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 C6orf15Q6UXA7 325 aaPredicted RBP13.05□□□□□ -0.32
RPA3-202ENST00000396682 NPNTQ6UXI9 565 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 B4GALNT4Q76KP1 1039 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 PRSS42Q7Z5A4 293 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 NT5DC3Q86UY8 548 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 TRIM48Q8IWZ4 208 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 SPATA22Q8NHS9 363 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 KLHL6Q8WZ60 621 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 ZNF830Q96NB3 372 aaPredicted RBP13.05□□□□□ -0.32
RPA3-202ENST00000396682 AGAP3Q96P47 875 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 SLC25A51Q9H1U9 297 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 CBX8Q9HC52 389 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 POT1Q9NUX5 634 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 WDR37Q9Y2I8 494 aa13.05□□□□□ -0.32
RPA3-202ENST00000396682 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
RPA3-202ENST00000396682 LRRD1A4D1F6 860 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 ZNF487B1APH4 448 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 VEGFDO43915 354 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 RASSF9O75901 435 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 NDUFA10O95299 355 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 MT-CYBP00156 380 aaPredicted RBP13.04□□□□□ -0.32
RPA3-202ENST00000396682 H2AFZP0C0S5 128 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 FGF5P12034 268 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 UBASH3AP57075 661 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 CDK18Q07002 472 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 SEPT6Q14141 434 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 ERV3-1Q14264 604 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 ZFYVE27Q5T4F4 411 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 AGAP9Q5VTM2 703 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 WASH2PQ6VEQ5 465 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 FAM92BQ6ZTR7 304 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 H2AFVQ71UI9 128 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 RASGRP3Q8IV61 690 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 MIB2Q96AX9 1013 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 VPS35Q96QK1 796 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 GPR63Q9BZJ6 419 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 BPIFA1Q9NP55 256 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 WASH6PQ9NQA3 447 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 RAD18Q9NS91 495 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 TRIM10Q9UDY6 481 aa13.04□□□□□ -0.32
RPA3-202ENST00000396682 SPTBN1Q01082 2364 aaKnown RBP13.03□□□□□ -0.32
RPA3-202ENST00000396682 MTSS1O43312 755 aa13.03□□□□□ -0.32
RPA3-202ENST00000396682 SPAG6O75602 509 aa13.03□□□□□ -0.32
RPA3-202ENST00000396682 CDK14O94921 469 aa13.03□□□□□ -0.32
RPA3-202ENST00000396682 PDGFAP04085 211 aa13.03□□□□□ -0.32
RPA3-202ENST00000396682 NELFEP18615 380 aaKnown RBP13.03□□□□□ -0.32
RPA3-202ENST00000396682 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
RPA3-202ENST00000396682 CASP14P31944 242 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms