RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CACHD1Q5VU97 1274 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 NCBP2-AS2Q69YL0 99 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 TXNRD3NBQ6F5E7 133 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 LRRTM4Q86VH4 590 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 KCTD6Q8NC69 237 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 GLYATL1Q969I3 302 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 HDAC11Q96DB2 347 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 ZNF830Q96NB3 372 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 SLC40A1Q9NP59 571 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 LHX9Q9NQ69 397 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 CUEDC1Q9NWM3 386 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 SEMA5BQ9P283 1151 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 ZNF624Q9P2J8 865 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 ANAPC7Q9UJX3 599 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 PCDHGA9Q9Y5G4 932 aaKnown RBP17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 SLC30A1Q9Y6M5 507 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 MYO9AB2RTY4 2548 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 CDC14CA4D256 554 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 TTLL8A6PVC2 850 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 ARSEP51690 589 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 NIPAL4Q0D2K0 466 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 DPYSL3Q14195 570 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 TDRD12Q587J7 1177 aaKnown RBP17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 FIGNQ5HY92 759 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 ADGRG6Q86SQ4 1221 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 KMT5CQ86Y97 462 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 HPS6Q86YV9 775 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 SYN2Q92777 582 aaPredicted RBP17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 CXorf40BQ96DE9 158 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 BRD8Q9H0E9 1235 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 PCDHGB7Q9Y5F8 929 aa17.22■□□□□ 0.35
EXOSC3-202ENST00000396521 AGFG2O95081 481 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 CYP1A2P05177 515 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 HLA-DQB2P05538 268 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 CD86P42081 329 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 HALP42357 657 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 SSR1P43307 286 aaKnown RBP17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 RPS15P62841 145 aaKnown RBP17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 SH3BP2P78314 561 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 PDE1BQ01064 536 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 ACY1Q03154 408 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 MMRN1Q13201 1228 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 SLC14A2Q15849 920 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 UGT8Q16880 541 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 SYVN1Q86TM6 617 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 CCNYQ8ND76 341 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 OR8K5Q8NH50 307 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 BPIFA3Q9BQP9 254 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 NUP85Q9BW27 656 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 SCHIP1Q9P0W5 487 aaPredicted RBP17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 RARRES3Q9UL19 164 aa17.21■□□□□ 0.35
EXOSC3-202ENST00000396521 CDK14O94921 469 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 CD48P09326 243 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 FURINP09958 794 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 LEPRP48357 1165 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 PGDP52209 483 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 E4F1Q66K89 784 aaPredicted RBP17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 CAPRIN2Q6IMN6 1127 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 CCDC70Q6NSX1 233 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 TMC3Q7Z5M5 1100 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 CPT1CQ8TCG5 803 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 DTX3LQ8TDB6 740 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 BRSK1Q8TDC3 778 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 FAF2Q96CS3 445 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 SLC41A2Q96JW4 573 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 VPS35Q96QK1 796 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 CD180Q99467 661 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 THAP2Q9H0W7 228 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 PLEKHB1Q9UF11 243 aaPredicted RBP17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 SLC23A2Q9UGH3 650 aa17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 G3BP2Q9UN86 482 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-202ENST00000396521 K7EM74 188 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 JCHAINP01591 159 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 MMP2P08253 660 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 SKILP12757 684 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 NR1D1P20393 614 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 PTPN4P29074 926 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 IFI35P80217 286 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 GPR18Q14330 331 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 ZDHHC20Q5W0Z9 365 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 PAPD7Q5XG87 772 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 IRGCQ6NXR0 463 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 CARFQ8N187 725 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 SIDT2Q8NBJ9 832 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 GPR26Q8NDV2 337 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 CT55Q8WUE5 264 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 IQCDQ96DY2 449 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 TTC25Q96NG3 672 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 SLC25A23Q9BV35 468 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 GPR63Q9BZJ6 419 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 ACTL8Q9H568 366 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.19■□□□□ 0.34
EXOSC3-202ENST00000396521 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 ZNF487B1APH4 448 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 GOLGA6L22H0YM25 854 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 BRAFP15056 766 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms