RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 GPSM1Q86YR5 675 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 PELI3Q8N2H9 469 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 CHST14Q8NCH0 376 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 C19orf60Q96EN9 201 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 SCRN2Q96FV2 425 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 PANX3Q96QZ0 392 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 CPEB1Q9BZB8 566 aaKnown RBP12.02□□□□□ -0.49
ITGB1-202ENST00000396033 CIPCQ9C0C6 399 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 SEMA4BQ9NPR2 832 aaPredicted RBP12.02□□□□□ -0.49
ITGB1-202ENST00000396033 DHRS7Q9Y394 339 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
ITGB1-202ENST00000396033 LRRC42Q9Y546 428 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 LAMA3Q16787 3333 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 TRIM24O15164 1050 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 PSMG1O95456 288 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 CLCQ05315 142 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 TBL3Q12788 808 aaKnown RBP12.02□□□□□ -0.49
ITGB1-202ENST00000396033 LCP2Q13094 533 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 DMC1Q14565 340 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 HERC3Q15034 1050 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 LYPLAL1Q5VWZ2 237 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 NAF1Q96HR8 494 aaKnown RBP12.02□□□□□ -0.49
ITGB1-202ENST00000396033 ZDHHC7Q9NXF8 308 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 CD274Q9NZQ7 290 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 ZNF106Q9H2Y7 1883 aaKnown RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ZNF197O14709 1029 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 AZIN1O14977 448 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 UBDO15205 165 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 GPC4O75487 556 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 PDE5AO76074 875 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 RPS17P08708 135 aaKnown RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 POLR2EP19388 210 aaKnown RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 RECQLP46063 649 aaPredicted RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CCDC6Q16204 474 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 LRRC73Q5JTD7 316 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 OR52E8Q6IFG1 317 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 TXNDC11Q6PKC3 985 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 AHI1Q8N157 1196 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CBARPQ8N350 705 aaPredicted RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 GPR26Q8NDV2 337 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CDH22Q9UJ99 828 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 PRSS21Q9Y6M0 314 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 TRBV5-4A0A0C4DH59 114 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 STX16-NPEPL1H3BU86 382 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 STX16O14662 325 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 LIN7AO14910 233 aaPredicted RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CRCPO75575 148 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 RB1P06400 928 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 AGTR2P50052 363 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ERFP50548 548 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 FRA10AC1Q70Z53 315 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ADGRG2Q8IZP9 1017 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CLDN19Q8N6F1 224 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 LKAAEAR1Q8TD35 194 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 RCN3Q96D15 328 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 OTUB2Q96DC9 234 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ZNF641Q96N77 438 aaPredicted RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 UTP6Q9NYH9 597 aaKnown RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 PRRC2BQ5JSZ5 2229 aaKnown RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ATP6AP2A0A1C7CYW4 349 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 GRXCR1A8MXD5 290 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ATP6AP2O75787 350 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 TRIM16O95361 564 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 LHCGRP22888 699 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 WEE1P30291 646 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 HK3P52790 923 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 SESN3P58005 492 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 SQLEQ14534 574 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 GPR33Q49SQ1 333 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CHSY3Q70JA7 882 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CYB5D2Q8WUJ1 264 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 TWIST2Q8WVJ9 160 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 PBXIP1Q96AQ6 731 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 CCDC124Q96CT7 223 aaKnown RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 KCNA7Q96RP8 456 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 MCCC1Q96RQ3 725 aaPredicted RBP12.01□□□□□ -0.49
ITGB1-202ENST00000396033 DPP7Q9UHL4 492 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ZMYM5Q9UJ78 669 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 TMCO1Q9UM00 188 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 ERVW-1Q9UQF0 538 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 DNAJC15Q9Y5T4 150 aa12.01□□□□□ -0.49
ITGB1-202ENST00000396033 SLC9A3R1O14745 358 aaPredicted RBP12□□□□□ -0.49
ITGB1-202ENST00000396033 KLK8O60259 260 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 CA3P07451 260 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 FOXA1P55317 472 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 ACTR3P61158 418 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 UGT3A2Q3SY77 523 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 AP1ARQ63HQ0 302 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 KANK2Q63ZY3 851 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 TMEM215Q68D42 235 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 C16orf89Q6UX73 402 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 DDIASQ8IXT1 998 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 NXPE1Q8N323 547 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 KYQ8NBH2 561 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 ITFG1Q8TB96 612 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 DTX3LQ8TDB6 740 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 NRG4Q8WWG1 115 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 SORCS1Q8WY21 1168 aa12□□□□□ -0.49
ITGB1-202ENST00000396033 KLHL32Q96NJ5 620 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms