RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HGFP14210 728 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ETS1P14921 441 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 IL4RP24394 825 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 EEF1B2P24534 225 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 KIR3DL1P43629 444 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RAP1GDS1P52306 607 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ERVK-8P63133 956 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TRIM60Q495X7 471 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TAGAPQ8N103 731 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FKBP10Q96AY3 582 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ARMC5Q96C12 935 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 IL37Q9NZH6 218 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF407Q9C0G0 2248 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 A0A1W2PRU2 124 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 AOC2O75106 756 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TYRP14679 529 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TPH1P17752 444 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CCNHP51946 323 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TXNL4AP83876 142 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RCN1Q15293 331 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SPIN4Q56A73 249 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 IL27RAQ6UWB1 636 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NXPE1Q8N323 547 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ARL14EPQ8N8R7 260 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DHRS4Q9BTZ2 278 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TRMT61BQ9BVS5 477 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RHOBTB2Q9BYZ6 727 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CCSER2Q9H7U1 834 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CHCHD3Q9NX63 227 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HIVEP2P31629 2446 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TEX28O15482 410 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 COCHO43405 550 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SEC22BO75396 215 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 EPN2O95208 641 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 KCNH1O95259 989 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PROCP04070 461 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HLA-DQB2P05538 268 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PSMC3P17980 439 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ECHS1P30084 290 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GDF10P55107 478 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ERVK-21P61565 698 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF252P-AS1Q0IIN9 211 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ILF3Q12906 894 aaKnown RBP eCLIP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 OSTM1Q86WC4 334 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CFAP52Q8N1V2 620 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SNX31Q8N9S9 440 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZMIZ2Q8NF64 920 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SH3RF2Q8TEC5 729 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CCM2Q9BSQ5 444 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FAM192AQ9GZU8 254 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZDHHC3Q9NYG2 299 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CYTH4Q9UIA0 394 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FNDC1Q4ZHG4 1894 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZGRF1Q86YA3 2104 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 E9PBE3 544 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TOR1BO14657 336 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NRP2O60462 931 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 UGDHO60701 494 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TNFAIP8O95379 198 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 IGLV3-25P01717 112 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 KRT20P35900 424 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 RAET1GQ6H3X3 334 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LRRC70Q7Z2Q7 622 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 AMZ2Q86W34 360 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 C17orf64Q86WR6 236 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 P3H2Q8IVL5 708 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 C2CD4AQ8NCU7 369 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 OR52K2Q8NGK3 314 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ZDHHC6Q9H6R6 413 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 KIF17Q9P2E2 1029 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SLC12A4Q9UP95 1085 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 CAPN8A6NHC0 703 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 K7EPI3 171 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 STK25O00506 426 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PGLSO95336 258 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 AGR2O95994 175 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 FGF4P08620 206 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 MGAT3Q09327 533 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 AGKQ53H12 422 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 RTP2Q5QGT7 225 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TTC23Q5W5X9 447 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ESRP1Q6NXG1 681 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 FITM2Q8N6M3 262 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LINGO1Q96FE5 620 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 AIF1LQ9BQI0 150 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 KLHL4Q9C0H6 718 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 FAF1Q9UNN5 650 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ASF1AQ9Y294 204 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LOC285095A0A1B0GVY8 99 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NEMP2A6NFY4 417 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 WDR47O94967 919 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 IDSP22304 550 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 MAPK10P53779 464 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ANXA8L1Q5VT79 327 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TBC1D21Q8IYX1 336 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PYROXD2Q8N2H3 581 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NAF1Q96HR8 494 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PEBP4Q96S96 227 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms