RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CATSPERBQ9H7T0 1116 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 SLC40A1Q9NP59 571 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 JMJD1CQ15652 2540 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 PRRC2AP48634 2157 aaKnown RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 FAM170AA1A519 330 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 FAM221AA4D161 298 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 C19orf84I3L1E1 186 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 PSMA7O14818 248 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 FGF10O15520 208 aaPredicted RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 NUAK1O60285 661 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 KLF7O75840 302 aaPredicted RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 IPO13O94829 963 aaKnown RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 BRAFP15056 766 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 TDGF1P3P51864 188 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 TUBB4BP68371 445 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 NOMO3P69849 1222 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 OTUD4Q01804 1114 aaKnown RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 TUBB2AQ13885 445 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 DCAF10Q5QP82 559 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 HGSNATQ68CP4 663 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 LRRC66Q68CR7 880 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 DPY19L2P1Q6NXN4 242 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 ARHGAP36Q6ZRI8 547 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 SLFN11Q7Z7L1 901 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 MRGPRGQ86SM5 289 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 KMT5CQ86Y97 462 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 PPP4R1Q8TF05 950 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 PIH1D2Q8WWB5 315 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 TM9SF4Q92544 642 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 CELF6Q96J87 481 aaKnown RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 WDR77Q9BQA1 342 aaPredicted RBP13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 TUBB2BQ9BVA1 445 aa13.41□□□□□ -0.26
VCPKMT-201ENST00000395859 COL6A5A8TX70 2615 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 ASMTLO95671 621 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 LSM8O95777 96 aaKnown RBP13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 GNA14O95837 355 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 PEX11BO96011 259 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 VIPP01282 170 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 CYP11B1P15538 503 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 PON1P27169 355 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 GPR18Q14330 331 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 KYNUQ16719 465 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 ZNF789Q5FWF6 425 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 VWA2Q5GFL6 755 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 PRAMEF17Q5VTA0 474 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 IRGCQ6NXR0 463 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 PARP9Q8IXQ6 854 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 PGBD5Q8N414 524 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 OR8K5Q8NH50 307 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 TRAPPC9Q96Q05 1148 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 SMIM14Q96QK8 99 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 RIOK2Q9BVS4 552 aaKnown RBP13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 KCND1Q9NSA2 647 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 POT1Q9NUX5 634 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 PCMTD2Q9NV79 361 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 FZD10Q9ULW2 581 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 SIK3Q9Y2K2 1263 aa13.4□□□□□ -0.26
VCPKMT-201ENST00000395859 CSPG4Q6UVK1 2322 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 FADS2P1A8MWK0 482 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 PCDH17O14917 1159 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 GRID2O43424 1007 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 CREB3O43889 395 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 FZD6O60353 706 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 KLHL41O60662 606 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 PGLSO95336 258 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 NADKO95544 446 aaPredicted RBP13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 KLK3P07288 261 aaPredicted RBP13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 CD99P14209 185 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 STC1P52823 247 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 IL10RBQ08334 325 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 SLC10A7Q0GE19 358 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 NCF4Q15080 339 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 ZNF385CQ66K41 422 aaPredicted RBP13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 B3GNTL1Q67FW5 361 aaPredicted RBP13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 ABRAXAS1Q6UWZ7 409 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 PHYKPLQ8IUZ5 450 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 RBM12BQ8IXT5 1001 aaKnown RBP13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 RAVER1Q8IY67 606 aaKnown RBP13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 CPA5Q8WXQ8 436 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 NUDCD1Q96RS6 583 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 MAP3K3Q99759 626 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 MLPHQ9BV36 600 aaPredicted RBP13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 CARD9Q9H257 536 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 NOD2Q9HC29 1040 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 MCCC2Q9HCC0 563 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 SLC23A2Q9UGH3 650 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 CCDC88CQ9P219 2028 aa13.39□□□□□ -0.27
VCPKMT-201ENST00000395859 NBEAL1Q6ZS30 2694 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 GTPBP10A4D1E9 387 aaKnown RBP13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 MASP2O00187 686 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 MMP8P22894 467 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 HTR7P34969 479 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 RFC1P35251 1148 aaPredicted RBP13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 KIR3DL1P43629 444 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 RENBPP51606 427 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms