RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CRYL1Q9Y2S2 319 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PPIL1Q9Y3C6 166 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 DMDP11532 3685 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 CCDC189A1A4V9 331 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 CAPN8A6NHC0 703 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 MATN2O00339 956 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 STX7O15400 261 aaKnown RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 KITP10721 976 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PMLP29590 882 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 ABL2P42684 1182 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PSMD8P48556 350 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 IDH3AP50213 366 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 ELF3P78545 371 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 GALNT1Q10472 559 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PRKAA1Q13131 559 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 RIPK1Q13546 671 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 SETMARQ53H47 684 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 AARS2Q5JTZ9 985 aaKnown RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 EPGNQ6UW88 154 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PIM3Q86V86 326 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PIANPQ8IYJ0 282 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 LSMEM2Q8N112 164 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 RHEBL1Q8TAI7 183 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PIP4K2CQ8TBX8 421 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 BIRC8Q96P09 236 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 HHIPQ96QV1 700 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 OSBPL1AQ9BXW6 950 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 ILKAPQ9H0C8 392 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 RSPH9Q9H1X1 276 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 DLGAP2Q9P1A6 1054 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 FKBPLQ9UIM3 349 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PPM1HQ9ULR3 514 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 COMMD10Q9Y6G5 202 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 OAS3Q9Y6K5 1087 aaKnown RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 MYO15AQ9UKN7 3530 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 CACNA1IQ9P0X4 2223 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 C1QTNF3-AMACRE9PGA6 284 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 CD1DP15813 335 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 CALB2P22676 271 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 MC4RP32245 332 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 METAP1P53582 386 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 NAGLUP54802 743 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 ARL13AQ5H913 290 aaPredicted RBP14.97□□□□□ -0.01
SCAF11-204ENST00000395454 FBXW10Q5XX13 1052 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 GDPD4Q6W3E5 623 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 SPATA6LQ8N4H0 392 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 TSTD1Q8NFU3 115 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 HMGB4Q8WW32 186 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 LRIG1Q96JA1 1093 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 KLHL32Q96NJ5 620 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 CCDC106Q9BWC9 280 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 SUV39H2Q9H5I1 410 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 FBRSQ9HAH7 460 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 CD248Q9HCU0 757 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 ARL8BQ9NVJ2 186 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 NCKIPSDQ9NZQ3 722 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 TRIM33Q9UPN9 1127 aa14.97□□□□□ -0.01
SCAF11-204ENST00000395454 A8MT66 165 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 SLCO1B7G3V0H7 640 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 PFDN6O15212 129 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 IPO13O94829 963 aaKnown RBP14.96□□□□□ -0.01
SCAF11-204ENST00000395454 PRSS56P0CW18 603 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 PTPN4P29074 926 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 EPHB1P54762 984 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 CST6Q15828 149 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 METTL21CQ5VZV1 264 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 ZNF776Q68DI1 518 aaPredicted RBP14.96□□□□□ -0.01
SCAF11-204ENST00000395454 ANO7Q6IWH7 933 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 PSAPL1Q6NUJ1 521 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 LYSMD3Q7Z3D4 306 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 SLC22A9Q8IVM8 553 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 PGBD3Q8N328 593 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 TMIEQ8NEW7 156 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 UTP4Q969X6 686 aaKnown RBP14.96□□□□□ -0.01
SCAF11-204ENST00000395454 L3HYPDHQ96EM0 354 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 NSL1Q96IY1 281 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 CNDP1Q96KN2 507 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 MRGPRX1Q96LB2 322 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 ZNF641Q96N77 438 aaPredicted RBP14.96□□□□□ -0.01
SCAF11-204ENST00000395454 MCCC1Q96RQ3 725 aaPredicted RBP14.96□□□□□ -0.01
SCAF11-204ENST00000395454 DYRK4Q9NR20 520 aa14.96□□□□□ -0.01
SCAF11-204ENST00000395454 SPATA6Q9NWH7 488 aaPredicted RBP14.96□□□□□ -0.01
SCAF11-204ENST00000395454 APOBEC2Q9Y235 224 aaKnown RBP14.96□□□□□ -0.01
SCAF11-204ENST00000395454 GAPDHSO14556 408 aaPredicted RBP14.96□□□□□ -0.02
SCAF11-204ENST00000395454 MID1O15344 667 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 CHRNGP07510 517 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 KRT16P08779 473 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 NDUFV2P19404 249 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 CXCL12P48061 93 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 RPL14P50914 215 aaKnown RBP14.96□□□□□ -0.02
SCAF11-204ENST00000395454 CACNG1Q06432 222 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 ZNF805Q5CZA5 627 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 FAM46CQ5VWP2 391 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 KIAA1324Q6UXG2 1013 aaKnown RBP14.96□□□□□ -0.02
SCAF11-204ENST00000395454 CERS6Q6ZMG9 384 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 PACS2Q86VP3 889 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 CBARPQ8N350 705 aaPredicted RBP14.96□□□□□ -0.02
SCAF11-204ENST00000395454 PTERQ96BW5 349 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 SIPA1Q96FS4 1042 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 PPP1R16AQ96I34 528 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms