RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ZNF7P17097 686 aaPredicted RBP20.78■□□□□ 0.92
TRAF4-203ENST00000394925 RPL10P27635 214 aaKnown RBP20.78■□□□□ 0.92
TRAF4-203ENST00000394925 CASP14P31944 242 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 UQCRFS1P47985 274 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 HIST2H2BCQ6DN03 193 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 LRRTM4Q86VH4 590 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 PPP1R3BQ86XI6 285 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 CPNE8Q86YQ8 564 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 GLYATL1Q969I3 302 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 ZSCAN5AQ9BUG6 496 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 SHOC2Q9UQ13 582 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 UNC79Q9P2D8 2635 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 OR52A4PA6NMU1 304 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 GPR89AB7ZAQ6 455 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 MTX2O75431 263 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 DNAJB5O75953 348 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 PDGFAP04085 211 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 CYP1A2P05177 515 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 PIRTP0C851 137 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 GPR89BP0CG08 455 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 BRAFP15056 766 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 MX2P20592 715 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 CAPZBP47756 277 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 TYRO3Q06418 890 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 SLC10A2Q12908 348 aaPredicted RBP20.77■□□□□ 0.92
TRAF4-203ENST00000394925 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRAF4-203ENST00000394925 FAM182AQ5T1J6 154 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 IRGCQ6NXR0 463 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 PRSS42Q7Z5A4 293 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 TRAM1L1Q8N609 369 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 CT55Q8WUE5 264 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 KLHL6Q8WZ60 621 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 ZDHHC12Q96GR4 267 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 ZNF670Q9BS34 389 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 LHX9Q9NQ69 397 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 POT1Q9NUX5 634 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 TRIM10Q9UDY6 481 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 PCDHGA6Q9Y5G7 932 aa20.77■□□□□ 0.92
TRAF4-203ENST00000394925 GOLGA6L3A6NEY3 463 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 TTLL8A6PVC2 850 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 KCNK1O00180 336 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 VPS4BO75351 444 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 TIAF1O95411 115 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 MT-ND3P03897 115 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 DRG2P55039 364 aaKnown RBP20.76■□□□□ 0.91
TRAF4-203ENST00000394925 DCDC1P59894 354 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 GPR18Q14330 331 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 HGSNATQ68CP4 663 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 ABRAXAS1Q6UWZ7 409 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 PQLC3Q8N755 202 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 EFCAB3Q8N7B9 438 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 HDAC11Q96DB2 347 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 CXorf40BQ96DE9 158 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 NAP1L5Q96NT1 182 aaPredicted RBP20.76■□□□□ 0.91
TRAF4-203ENST00000394925 TIMM29Q9BSF4 260 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 NAT10Q9H0A0 1025 aaKnown RBP20.76■□□□□ 0.91
TRAF4-203ENST00000394925 SLC40A1Q9NP59 571 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 VPS4AQ9UN37 437 aa20.76■□□□□ 0.91
TRAF4-203ENST00000394925 AGFG2O95081 481 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 RECKO95980 971 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 NELFEP18615 380 aaKnown RBP20.75■□□□□ 0.91
TRAF4-203ENST00000394925 GNLYP22749 145 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 ZBTB17Q13105 803 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 SEMA5AQ13591 1074 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 PDK2Q15119 407 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 ANO6Q4KMQ2 910 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 ZNF547Q8IVP9 402 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 APLFQ8IW19 511 aaPredicted RBP20.75■□□□□ 0.91
TRAF4-203ENST00000394925 CNTD1Q8N815 330 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 TRIM55Q9BYV6 548 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 BRD8Q9H0E9 1235 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 ACTL8Q9H568 366 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 PDE7BQ9NP56 450 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 MYO9AB2RTY4 2548 aa20.75■□□□□ 0.91
TRAF4-203ENST00000394925 A0A1B0GTH6 734 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 VEGFDO43915 354 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 CDK14O94921 469 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 IDSP22304 550 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 PPP1CAP62136 330 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 NFKBIBQ15653 356 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 KHDC1Q4VXA5 237 aaKnown RBP20.74■□□□□ 0.91
TRAF4-203ENST00000394925 PDPK2PQ6A1A2 396 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 CYB5D1Q6P9G0 228 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 TMC3Q7Z5M5 1100 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 MAP7D3Q8IWC1 876 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 RBM12BQ8IXT5 1001 aaKnown RBP20.74■□□□□ 0.91
TRAF4-203ENST00000394925 FAF2Q96CS3 445 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 TRIB3Q96RU7 358 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 RUFY1Q96T51 708 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 CEP41Q9BYV8 373 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 GPR63Q9BZJ6 419 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 RAD18Q9NS91 495 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 EPHA6Q9UF33 1036 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 RARRES3Q9UL19 164 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 ZNF711Q9Y462 761 aa20.74■□□□□ 0.91
TRAF4-203ENST00000394925 MED13Q9UHV7 2174 aa20.73■□□□□ 0.91
TRAF4-203ENST00000394925 SMTNL1A8MU46 457 aa20.73■□□□□ 0.91
TRAF4-203ENST00000394925 C21orf140B9A014 251 aa20.73■□□□□ 0.91
TRAF4-203ENST00000394925 TAS2R40P59535 323 aa20.73■□□□□ 0.91
TRAF4-203ENST00000394925 TUBB3Q13509 450 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms