RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 NEDD8Q15843 81 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 RGS21Q2M5E4 152 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 MS4A13Q5J8X5 152 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 ALG1LQ6GMV1 187 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 NIPAL1Q6NVV3 410 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 AGMOQ6ZNB7 445 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 TMEM26Q6ZUK4 368 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 TFAP2DQ7Z6R9 452 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 LDB1Q86U70 411 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 ZNF683Q8IZ20 524 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 OR52E4Q8NGH9 312 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 VPS33AQ96AX1 596 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 KLHL5Q96PQ7 755 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 TMLHEQ9NVH6 421 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 MIOSQ9NXC5 875 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 NUDT4Q9NZJ9 180 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 DNAJB9Q9UBS3 223 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 TRMT6Q9UJA5 497 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 PCTPQ9UKL6 214 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 ORC6Q9Y5N6 252 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 NLRC5Q86WI3 1866 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 PLXNA3P51805 1871 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 A0A1W2PPW3 197 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 OR51F1A6NGY5 319 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 KPNA4O00629 521 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 GSTA4O15217 222 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 SYNCRIPO60506 623 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 PRAMEF11O60813 436 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 KCNH1O95259 989 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 C1RP00736 705 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 UGT1A6P19224 532 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 UGT1A1P22309 533 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 UGT1A4P22310 534 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 UGT1A3P35503 534 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 UGT1A5P35504 534 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 CASP2P42575 452 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 DIO3P55073 304 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 IL2P60568 153 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 PWP1Q13610 501 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 TAF1AQ15573 450 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 FUT11Q495W5 492 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 RABL3Q5HYI8 236 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 ARTNQ5T4W7 220 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 ELMSAN1Q6PJG2 1045 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 GPSM1Q86YR5 675 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 SCN4BQ8IWT1 228 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 RIMKLAQ8IXN7 391 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 OFCC1Q8IZS5 231 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 CARNMT1Q8N4J0 409 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 FNDC5Q8NAU1 212 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 OR10T2Q8NGX3 314 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 CHPT1Q8WUD6 406 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 S100ZQ8WXG8 99 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 CDKN2AIPNLQ96HQ2 116 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 CCDC138Q96M89 665 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 NSUN5Q96P11 429 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 SEPHS2Q99611 448 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 RBM4BQ9BQ04 359 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 FEM1AQ9BSK4 669 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 RBM4Q9BWF3 364 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 OSBPL10Q9BXB5 764 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 RAD21L1Q9H4I0 556 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 GORASP2Q9H8Y8 452 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 ZFYVE28Q9HCC9 887 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 USE1Q9NZ43 259 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 COQ6Q9Y2Z9 468 aa9.95□□□□□ -0.82
UBE2D3-208ENST00000394803 DOCK4Q8N1I0 1966 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 SOBPA7XYQ1 873 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 H3BMM5 538 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 BTN3A1O00481 513 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 CLPXO76031 633 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 SNAP29O95721 258 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 INHBBP09529 407 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 ZNF865P0CJ78 1059 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 HAPLN1P10915 354 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 GGT1P19440 569 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 PSMA3P25788 255 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 TPP2P29144 1249 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 AKT1P31749 480 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 PSMD7P51665 324 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 CLCN4P51793 760 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 TIAL1Q01085 375 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 TRAF2Q12933 501 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 ZNF846Q147U1 533 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 PAGE3Q5JUK9 113 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 ANKRD26P1Q6NSI1 321 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 PAQR3Q6TCH7 311 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 SYVN1Q86TM6 617 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 KIAA2013Q8IYS2 634 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 STK40Q8N2I9 435 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 SNRNP27Q8WVK2 155 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 LPPQ93052 612 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 FUBP1Q96AE4 644 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 ACDQ96AP0 544 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 ISG20Q96AZ6 181 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 PPP3R2Q96LZ3 170 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 KCNA7Q96RP8 456 aa9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 WDR12Q9GZL7 423 aaKnown RBP9.94□□□□□ -0.82
UBE2D3-208ENST00000394803 MUC3BQ9H195 1237 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms