RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 VCPIP1Q96JH7 1222 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CNOT6LQ96LI5 555 aaKnown RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 FAM227BQ96M60 508 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 MLPHQ9BV36 600 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 ACTRT3Q9BYD9 372 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PKIBQ9C010 78 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CDCP1Q9H5V8 836 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SRD5A3Q9H8P0 318 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 COG4Q9H9E3 785 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TRPV5Q9NQA5 729 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PRDM7Q9NQW5 492 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 AOX1Q06278 1338 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SMCO3A2RU48 225 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 OR6C68A6NDL8 312 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 FADS2P1A8MWK0 482 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CXorf49A8MYA2 514 aaPredicted RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 N4BP3O15049 544 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CBSLP0DN79 551 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 RRASP10301 218 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 RALAP11233 206 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 FCER1AP12319 257 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 ATF2P15336 505 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 ITGB6P18564 788 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 GNAZP19086 355 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 ITGAXP20702 1163 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 MMP8P22894 467 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SLC5A2P31639 672 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CBSP35520 551 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SUOXP51687 545 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 DGKEP52429 567 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 HUNKP57058 714 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 IRX4P78413 519 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SPP2Q13103 211 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 TYSND1Q2T9J0 566 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 ZC3H14Q6PJT7 736 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 DOK6Q6PKX4 331 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 TRMT11Q7Z4G4 463 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 CIR1Q86X95 450 aaPredicted RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 CHERPQ8IWX8 916 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.52□□□□□ -1.85
XRN1-202ENST00000392981 ABI1Q8IZP0 508 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 NIPA2Q8N8Q9 360 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SCAIQ8N9R8 606 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SUN3Q8TAQ9 357 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CHURC1Q8WUH1 139 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 PEX13Q92968 403 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 TSG101Q99816 390 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 MMTAG2Q9BU76 263 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 FSD1LQ9BXM9 530 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 ADGRE3Q9BY15 652 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 WDR6Q9NNW5 1121 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 DLL4Q9NR61 685 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 PTTG2Q9NZH5 202 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 LIPGQ9Y5X9 500 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CUL7Q14999 1698 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 TCAF2A6NFQ2 919 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 E7ENX8 843 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 TLR4O00206 839 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 GDF9O60383 454 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 FRAT2O75474 233 aaPredicted RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 CYP11B2P19099 503 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SSTR1P30872 391 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CORO1AP31146 461 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 FNTAP49354 379 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 EPHA5P54756 1037 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 ZP2Q05996 745 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SP140Q13342 867 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CLCA4Q14CN2 919 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 R3HDM1Q15032 1099 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 LRIF1Q5T3J3 769 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 KDM7AQ6ZMT4 941 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 UTS2BQ765I0 119 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 METTL25Q8N6Q8 603 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 MRPL43Q8N983 215 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 HJURPQ8NCD3 748 aaPredicted RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 HUS1BQ8NHY5 278 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CKAP2Q8WWK9 683 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 COQ8BQ96D53 544 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CCDC120Q96HB5 630 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SELENOSQ9BQE4 189 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 TMEM47Q9BQJ4 181 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 TDRD1Q9BXT4 1180 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 PIGMQ9H3S5 423 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 PCDH18Q9HCL0 1135 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 GLRX2Q9NS18 164 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 MRPS7Q9Y2R9 242 aaKnown RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 RAP2CQ9Y3L5 183 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 ASB3Q9Y575 518 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 A0A0A6YYK5 440 aaPredicted RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 KCNU1A8MYU2 1149 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 VWA5AO00534 786 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CLDN3O15551 220 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 RPS6KA5O75582 802 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 SEC24DO94855 1032 aaPredicted RBP3.52□□□□□ -1.85
XRN1-202ENST00000392981 GPANK1O95872 356 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CHRM2P08172 466 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CD63P08962 238 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 CEBPBP17676 345 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 MAP2K2P36507 400 aa3.52□□□□□ -1.85
XRN1-202ENST00000392981 HSD17B2P37059 387 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms