RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-203ENST00000391813 FYNP06241 537 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 PGRP06401 933 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 PTX3P26022 381 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-203ENST00000391813 CD52P31358 61 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 CTNNB1P35222 781 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 GALNT3Q14435 633 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 TTC29Q8NA56 475 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-203ENST00000391813 MFSD3Q96ES6 412 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 BBS4Q96RK4 519 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 SPTLC1O15269 473 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 S100A6P06703 90 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 ASGR1P07306 291 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 ADH1AP07327 375 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 PORP16435 677 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-203ENST00000391813 GRM5P41594 1212 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 EVX2Q03828 476 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 IL18Q14116 193 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 ELMO1Q92556 727 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 SLC7A6OSQ96CW6 309 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-203ENST00000391813 SEMA3CQ99985 751 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 GBA3Q9H227 469 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 MKL2Q9ULH7 1088 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 IRAK3Q9Y616 596 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 A0A1W2PPW3 197 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 SLC30A4O14863 429 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 KPNA5O15131 536 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 UROSP10746 265 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 PRG2P13727 222 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 COPS4Q9BT78 406 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 GPN1Q9HCN4 374 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-203ENST00000391813 OXSMQ9NWU1 459 aa19.54■□□□□ 0.72
SHANK1-203ENST00000391813 ADAMDEC1O15204 470 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 INHAP05111 366 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 APLP1P51693 650 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 CRHR2Q13324 411 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 HSDL1Q3SXM5 330 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 ERMP1Q7Z2K6 904 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 TRPV3Q8NET8 790 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 SLC22A4Q9H015 551 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 LYVE1Q9Y5Y7 322 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 SLC9A3R1O14745 358 aaPredicted RBP19.53■□□□□ 0.72
SHANK1-203ENST00000391813 SERPINB7O75635 380 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 CKBP12277 381 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 LPOP22079 712 aaPredicted RBP19.53■□□□□ 0.72
SHANK1-203ENST00000391813 KIR3DL1P43629 444 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 TCEAL1Q15170 157 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 LINGO1Q96FE5 620 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 LRRC3Q9BY71 257 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 CD48P09326 243 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 AZGP1P25311 298 aaKnown RBP19.53■□□□□ 0.72
SHANK1-203ENST00000391813 CYP2A13Q16696 494 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 USP41Q3LFD5 358 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 CLEC6AQ6EIG7 209 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 DCLRE1AQ6PJP8 1040 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 MOSPD2Q8NHP6 518 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 EXD2Q9NVH0 621 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 RBPJLQ9UBG7 517 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 BUD23O43709 281 aaKnown RBP19.53■□□□□ 0.72
SHANK1-203ENST00000391813 AP2A2O94973 939 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 DARSP14868 501 aaKnown RBP19.53■□□□□ 0.72
SHANK1-203ENST00000391813 CD36P16671 472 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 ATF4P18848 351 aaPredicted RBP19.53■□□□□ 0.72
SHANK1-203ENST00000391813 KCNA10Q16322 511 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 AMIGO3Q86WK7 504 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 TEX47Q8TBZ9 253 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 ZYG11BQ9C0D3 744 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 SRRDQ9UH36 339 aa19.53■□□□□ 0.72
SHANK1-203ENST00000391813 AJAP1Q9UKB5 411 aaPredicted RBP19.53■□□□□ 0.72
SHANK1-203ENST00000391813 ILVBLA1L0T0 632 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 GPR25O00155 361 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 CHST10O43529 356 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 MFSD11O43934 449 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 BCL2L1Q07817 233 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 CCNIQ14094 377 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 CPSF6Q16630 551 aaKnown RBP eCLIP19.52■□□□□ 0.72
SHANK1-203ENST00000391813 PPP1R26Q5T8A7 1209 aaPredicted RBP19.52■□□□□ 0.72
SHANK1-203ENST00000391813 GMIPQ9P107 970 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 FAM159BA6NKW6 160 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 CILPO75339 1184 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 CDH1P12830 882 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 ALDH4A1P30038 563 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 FAUP35544 74 aaKnown RBP19.52■□□□□ 0.72
SHANK1-203ENST00000391813 CLCQ05315 142 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 DNAJB8Q8NHS0 232 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 ANKRD49Q8WVL7 239 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 ZNF696Q9H7X3 374 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 FAM105AQ9NUU6 356 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 DERAQ9Y315 318 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 PCDHA2Q9Y5H9 948 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 PRLP01236 227 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 IGFBP4P22692 258 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 GPX6P59796 221 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 BRMS1LQ5PSV4 323 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 LYPLAL1Q5VWZ2 237 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 BHLHB9Q6PI77 547 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 ZNF773Q6PK81 442 aa19.52■□□□□ 0.72
SHANK1-203ENST00000391813 C9orf43Q8TAL5 461 aaPredicted RBP19.52■□□□□ 0.72
SHANK1-203ENST00000391813 ZNF214Q9UL59 606 aaPredicted RBP19.52■□□□□ 0.72
SHANK1-203ENST00000391813 ECDO95905 644 aaPredicted RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms